Analysis of interatomic Contacts of Structural Units in PDB entry:
9N93


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9N93 entry

There is 1 chain in PDB entry 9N93 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 44TYR 728
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9N93. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 72Right-handed alpha
Helix 2
AA2
A
77 81Right-handed 310
Helix 3
AA3
A
124 132Right-handed alpha
Helix 4
AA4
A
132 160Right-handed alpha
Helix 5
AA5
A
160 167Right-handed alpha
Helix 6
AA6
A
178 186Right-handed 310
Helix 7
AA7
A
192 221Right-handed alpha
Helix 8
AA8
A
240 251Right-handed alpha
Helix 9
AA9
A
267 294Right-handed alpha
Helix 10
AB1
A
320 343Right-handed alpha
Helix 11
AB2
A
356 369Right-handed alpha
Helix 12
AB3
A
391 395Right-handed 310
Helix 13
AB4
A
402 406Right-handed 310
Helix 14
AB5
A
407 411Right-handed 310
Helix 15
AB6
A
418 437Right-handed alpha
Helix 16
AB7
A
438 449Right-handed alpha
Helix 17
AB8
A
461 466Right-handed alpha
Helix 18
AB9
A
466 489Right-handed alpha
Helix 19
AC1
A
494 514Right-handed alpha
Helix 20
AC2
A
515 521Right-handed alpha
Helix 21
AC3
A
524 533Right-handed alpha
Helix 22
AC4
A
542 546Right-handed 310
Helix 23
AC5
A
551 574Right-handed alpha
Helix 24
AC6
A
574 587Right-handed alpha
Helix 25
AC7
A
592 602Right-handed alpha
Helix 26
AC8
A
608 624Right-handed alpha
Helix 27
AC9
A
630 653Right-handed alpha
Helix 28
AD1
A
662 672Right-handed alpha
Helix 29
AD2
A
672 690Right-handed alpha
Helix 30
AD3
A
694 719Right-handed alpha
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There are 2 sheets in PDB entry 9N93. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 264first strand
Strand 2
A
346 354anti-parallel
Strand 3
A
229 233anti-parallel
Strand 4
A
396 397anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 299first strand
Strand 2
A
318 319anti-parallel
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