Analysis of interatomic Contacts of Structural Units in PDB entry:
9NA8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9NA8 entry

There are 4 chains in PDB entry 9NA8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 19GLU 206
D
 GLN 6CYS 329
E
 ASP 119ASN 738
C
 ILE 102GLY 550
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 9NA8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 30Right-handed alpha
Helix 2
AA2
A
36 44Right-handed alpha
Helix 3
AA3
A
45 49Right-handed 310
Helix 4
AA4
A
50 90Right-handed alpha
Helix 5
AA5
A
90 96Right-handed alpha
Helix 6
AA6
A
97 100Right-handed 310
Helix 7
AA7
A
102 120Right-handed alpha
Helix 8
AA8
A
125 205Right-handed alpha
Helix 9
AA9
D
7 26Right-handed alpha
Helix 10
AB1
D
27 33Right-handed alpha
Helix 11
AB2
D
34 39Right-handed alpha
Helix 12
AB3
D
39 71Right-handed alpha
Helix 13
AB4
D
71 84Right-handed alpha
Helix 14
AB5
D
87 97Right-handed alpha
Helix 15
AB6
D
102 119Right-handed alpha
Helix 16
AB7
D
125 130Right-handed 310
Helix 17
AB8
D
131 198Right-handed alpha
Helix 18
AB9
D
198 203Right-handed alpha
Helix 19
AC1
D
206 216Right-handed alpha
Helix 20
AC2
D
225 244Right-handed alpha
Helix 21
AC3
D
247 251Right-handed 310
Helix 22
AC4
D
253 258Right-handed alpha
Helix 23
AC5
D
258 268Right-handed alpha
Helix 24
AC6
D
271 309Right-handed alpha
Helix 25
AC7
D
312 326Right-handed alpha
Helix 26
AC8
E
120 202Right-handed alpha
Helix 27
AC9
E
550 574Right-handed alpha
Helix 28
AD1
E
576 587Right-handed alpha
Helix 29
AD2
E
588 622Right-handed 310
Helix 30
AD3
E
623 628Right-handed alpha
Helix 31
AD4
E
640 645Right-handed 310
Helix 32
AD5
E
646 659Right-handed alpha
Helix 33
AD6
E
659 665Right-handed alpha
Helix 34
AD7
E
670 737Right-handed alpha
Helix 35
AD8
C
103 189Right-handed alpha
Helix 36
AD9
C
406 439Right-handed alpha
Helix 37
AE1
C
444 451Right-handed alpha
Helix 38
AE2
C
453 464Right-handed alpha
Helix 39
AE3
C
465 471Right-handed 310
Helix 40
AE4
C
472 476Right-handed 310
Helix 41
AE5
C
477 482Right-handed alpha
Helix 42
AE6
C
485 503Right-handed alpha
Helix 43
AE7
C
505 525Right-handed alpha
Helix 44
AE8
C
527 538Right-handed alpha
Helix 45
AE9
C
538 550Right-handed alpha
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There are no sheets in PDB entry 9NA8
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il