Analysis of interatomic Contacts of Structural Units in PDB entry:
9NA9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9NA9 entry

There are 4 chains in PDB entry 9NA9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 196GLU 298
D
 LYS 267ASP 368
E
 MET 1THR 747
C
 MET 1SER 617
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 28 helices in PDB entry 9NA9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
196 204Right-handed alpha
Helix 2
AA2
A
204 209Right-handed alpha
Helix 3
AA3
A
211 224Right-handed alpha
Helix 4
AA4
A
224 244Right-handed alpha
Helix 5
AA5
A
246 257Right-handed alpha
Helix 6
AA6
A
259 264Right-handed alpha
Helix 7
AA7
A
267 285Right-handed alpha
Helix 8
AA8
A
286 298Right-handed alpha
Helix 9
AA9
D
273 337Right-handed alpha
Helix 10
AB1
D
338 368Right-handed alpha
Helix 11
AB2
E
8 26Right-handed alpha
Helix 12
AB3
E
36 41Right-handed alpha
Helix 13
AB4
E
46 51Right-handed alpha
Helix 14
AB5
E
51 79Right-handed alpha
Helix 15
AB6
E
681 705Right-handed alpha
Helix 16
AB7
E
709 714Right-handed alpha
Helix 17
AB8
E
719 729Right-handed alpha
Helix 18
AB9
E
733 740Right-handed alpha
Helix 19
AC1
E
741 747Right-handed alpha
Helix 20
AC2
C
2 9Right-handed alpha
Helix 21
AC3
C
14 20Right-handed alpha
Helix 22
AC4
C
21 26Right-handed alpha
Helix 23
AC5
C
28 35Right-handed alpha
Helix 24
AC6
C
35 52Right-handed alpha
Helix 25
AC7
C
53 67Right-handed alpha
Helix 26
AC8
C
541 571Right-handed alpha
Helix 27
AC9
C
571 590Right-handed alpha
Helix 28
AD1
C
597 617Right-handed alpha
Back to top of page
There are no sheets in PDB entry 9NA9
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il