Analysis of interatomic Contacts of Structural Units in PDB entry:
9NCQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9NCQ entry

There are 12 chains in PDB entry 9NCQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 228ILE 318
B
 ASP 228ILE 313
E
 ASP 228ILE 314
G
 LYS 231LEU 315
C
 SER 225ILE 318
F
 TYR 232LEU 315
D
 LEU 229ILE 314
H
 GLU 95ARG 184
I
 GLU 94GLN 187
L
 GLU 94ASN 188
K
 GLU 95ARG 184
J
 GLU 94ARG 184
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 9NCQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
232 240Right-handed alpha
Helix 2
AA2
A
241 250Right-handed alpha
Helix 3
AA3
A
255 265Right-handed alpha
Helix 4
AA4
A
271 285Right-handed alpha
Helix 5
AA5
A
290 300Right-handed alpha
Helix 6
AA6
A
303 318Right-handed alpha
Helix 7
AA7
B
232 237Right-handed alpha
Helix 8
AA8
B
238 240Right-handed 310
Helix 9
AA9
B
242 252Right-handed alpha
Helix 10
AB1
B
255 266Right-handed alpha
Helix 11
AB2
B
269 286Right-handed alpha
Helix 12
AB3
B
291 301Right-handed alpha
Helix 13
AB4
B
303 313Right-handed alpha
Helix 14
AB5
E
232 238Right-handed alpha
Helix 15
AB6
E
241 253Right-handed alpha
Helix 16
AB7
E
255 266Right-handed alpha
Helix 17
AB8
E
269 285Right-handed alpha
Helix 18
AB9
E
290 301Right-handed alpha
Helix 19
AC1
E
303 314Right-handed alpha
Helix 20
AC2
G
232 237Right-handed alpha
Helix 21
AC3
G
256 266Right-handed alpha
Helix 22
AC4
G
269 286Right-handed alpha
Helix 23
AC5
G
289 301Right-handed alpha
Helix 24
AC6
G
303 315Right-handed alpha
Helix 25
AC7
C
232 240Right-handed alpha
Helix 26
AC8
C
241 251Right-handed alpha
Helix 27
AC9
C
255 266Right-handed alpha
Helix 28
AD1
C
269 285Right-handed alpha
Helix 29
AD2
C
290 301Right-handed alpha
Helix 30
AD3
C
303 318Right-handed alpha
Helix 31
AD4
F
233 240Right-handed alpha
Helix 32
AD5
F
241 251Right-handed alpha
Helix 33
AD6
F
255 266Right-handed alpha
Helix 34
AD7
F
269 286Right-handed alpha
Helix 35
AD8
F
290 301Right-handed alpha
Helix 36
AD9
F
303 315Right-handed alpha
Helix 37
AE1
D
232 238Right-handed alpha
Helix 38
AE2
D
241 253Right-handed alpha
Helix 39
AE3
D
255 266Right-handed alpha
Helix 40
AE4
D
269 286Right-handed alpha
Helix 41
AE5
D
290 301Right-handed alpha
Helix 42
AE6
D
306 314Right-handed alpha
Helix 43
AE7
H
96 106Right-handed alpha
Helix 44
AE8
H
111 119Right-handed alpha
Helix 45
AE9
H
122 133Right-handed alpha
Helix 46
AF1
H
136 153Right-handed alpha
Helix 47
AF2
H
154 156Right-handed 310
Helix 48
AF3
H
157 168Right-handed alpha
Helix 49
AF4
H
171 184Right-handed alpha
Helix 50
AF5
I
95 105Right-handed alpha
Helix 51
AF6
I
111 119Right-handed alpha
Helix 52
AF7
I
122 131Right-handed alpha
Helix 53
AF8
I
136 152Right-handed alpha
Helix 54
AF9
I
153 156Right-handed 310
Helix 55
AG1
I
157 168Right-handed alpha
Helix 56
AG2
I
170 187Right-handed alpha
Helix 57
AG3
L
95 106Right-handed alpha
Helix 58
AG4
L
111 119Right-handed alpha
Helix 59
AG5
L
122 133Right-handed alpha
Helix 60
AG6
L
136 153Right-handed alpha
Helix 61
AG7
L
154 156Right-handed 310
Helix 62
AG8
L
157 168Right-handed alpha
Helix 63
AG9
L
171 188Right-handed alpha
Helix 64
AH1
K
96 106Right-handed alpha
Helix 65
AH2
K
111 118Right-handed alpha
Helix 66
AH3
K
122 133Right-handed alpha
Helix 67
AH4
K
137 153Right-handed alpha
Helix 68
AH5
K
157 168Right-handed alpha
Helix 69
AH6
K
171 184Right-handed alpha
Helix 70
AH7
J
95 106Right-handed alpha
Helix 71
AH8
J
111 119Right-handed alpha
Helix 72
AH9
J
122 133Right-handed alpha
Helix 73
AI1
J
137 153Right-handed alpha
Helix 74
AI2
J
158 163Right-handed alpha
Helix 75
AI3
J
163 168Right-handed alpha
Helix 76
AI4
J
170 184Right-handed alpha
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There are no sheets in PDB entry 9NCQ
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