Analysis of interatomic Contacts of Structural Units in PDB entry:
9NEI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9NEI entry

There are 5 chains in PDB entry 9NEI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 216THR 489
B
 LEU 216THR 489
C
 LEU 216THR 489
D
 LEU 216THR 489
G
 GLY 1ASP 15
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 9NEI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
224 248Right-handed alpha
Helix 2
AA2
A
278 298Right-handed alpha
Helix 3
AA3
A
311 327Right-handed alpha
Helix 4
AA4
A
358 368Right-handed alpha
Helix 5
AA5
A
369 378Right-handed 310
Helix 6
AA6
A
379 392Right-handed alpha
Helix 7
AA7
A
392 419Right-handed alpha
Helix 8
AA8
A
429 431Right-handed 310
Helix 9
AA9
A
432 441Right-handed alpha
Helix 10
AB1
A
452 471Right-handed alpha
Helix 11
AB2
A
473 489Right-handed alpha
Helix 12
AB3
B
226 248Right-handed alpha
Helix 13
AB4
B
278 298Right-handed alpha
Helix 14
AB5
B
311 326Right-handed alpha
Helix 15
AB6
B
358 368Right-handed alpha
Helix 16
AB7
B
369 378Right-handed 310
Helix 17
AB8
B
379 392Right-handed alpha
Helix 18
AB9
B
392 419Right-handed alpha
Helix 19
AC1
B
429 431Right-handed 310
Helix 20
AC2
B
432 441Right-handed alpha
Helix 21
AC3
B
452 472Right-handed alpha
Helix 22
AC4
B
473 489Right-handed alpha
Helix 23
AC5
C
223 248Right-handed alpha
Helix 24
AC6
C
278 298Right-handed alpha
Helix 25
AC7
C
311 327Right-handed alpha
Helix 26
AC8
C
358 368Right-handed alpha
Helix 27
AC9
C
369 378Right-handed 310
Helix 28
AD1
C
379 392Right-handed alpha
Helix 29
AD2
C
392 419Right-handed alpha
Helix 30
AD3
C
429 431Right-handed 310
Helix 31
AD4
C
432 441Right-handed alpha
Helix 32
AD5
C
452 472Right-handed alpha
Helix 33
AD6
C
473 488Right-handed alpha
Helix 34
AD7
D
226 248Right-handed alpha
Helix 35
AD8
D
278 298Right-handed alpha
Helix 36
AD9
D
311 327Right-handed alpha
Helix 37
AE1
D
358 368Right-handed alpha
Helix 38
AE2
D
369 378Right-handed 310
Helix 39
AE3
D
379 392Right-handed alpha
Helix 40
AE4
D
392 419Right-handed alpha
Helix 41
AE5
D
429 431Right-handed 310
Helix 42
AE6
D
432 441Right-handed alpha
Helix 43
AE7
D
452 472Right-handed alpha
Helix 44
AE8
D
473 489Right-handed alpha
Helix 45
AE9
G
10 14Right-handed 310
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There are no sheets in PDB entry 9NEI
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