Analysis of interatomic Contacts of Structural Units in PDB entry:
9NGW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9NGW entry

There are 16 chains in PDB entry 9NGW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 862	THR 1046
B	ILE 862	THR 1046
C	ILE 862	THR 1046
D	ILE 862	THR 1046
E	ILE 862	THR 1046
F	ILE 862	THR 1046
G	ILE 862	THR 1046
H	ILE 862	THR 1046
I	ILE 862	THR 1046
J	ILE 862	THR 1046
K	ILE 862	THR 1046
L	ILE 862	THR 1046
M	ILE 862	THR 1046
N	ILE 862	THR 1046
O	ILE 862	THR 1046
P	ILE 862	THR 1046

There are 68 helices in PDB entry 9NGW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	951	956	Right-handed alpha
Helix 2	AA2	A	961	974	Right-handed alpha
Helix 3	AA3	A	999	1004	Right-handed alpha
Helix 4	AA4	A	1007	1020	Right-handed alpha
Helix 5	AA5	A	1021	1025	Right-handed 310
Helix 6	AA6	B	961	974	Right-handed alpha
Helix 7	AA7	B	1007	1018	Right-handed alpha
Helix 8	AA8	B	1021	1025	Right-handed 310
Helix 9	AA9	C	951	956	Right-handed alpha
Helix 10	AB1	C	961	974	Right-handed alpha
Helix 11	AB2	C	1007	1018	Right-handed alpha
Helix 12	AB3	C	1021	1025	Right-handed 310
Helix 13	AB4	D	961	974	Right-handed alpha
Helix 14	AB5	D	999	1004	Right-handed alpha
Helix 15	AB6	D	1006	1018	Right-handed alpha
Helix 16	AB7	E	958	974	Right-handed alpha
Helix 17	AB8	E	999	1004	Right-handed alpha
Helix 18	AB9	E	1007	1018	Right-handed alpha
Helix 19	AC1	E	1021	1025	Right-handed 310
Helix 20	AC2	F	958	974	Right-handed alpha
Helix 21	AC3	F	999	1004	Right-handed alpha
Helix 22	AC4	F	1007	1018	Right-handed alpha
Helix 23	AC5	F	1021	1025	Right-handed 310
Helix 24	AC6	G	961	974	Right-handed alpha
Helix 25	AC7	G	999	1004	Right-handed alpha
Helix 26	AC8	G	1006	1020	Right-handed alpha
Helix 27	AC9	G	1021	1025	Right-handed 310
Helix 28	AD1	H	951	956	Right-handed alpha
Helix 29	AD2	H	961	974	Right-handed alpha
Helix 30	AD3	H	999	1004	Right-handed alpha
Helix 31	AD4	H	1006	1018	Right-handed alpha
Helix 32	AD5	H	1021	1025	Right-handed 310
Helix 33	AD6	I	955	974	Right-handed alpha
Helix 34	AD7	I	999	1004	Right-handed alpha
Helix 35	AD8	I	1007	1018	Right-handed alpha
Helix 36	AD9	I	1021	1025	Right-handed 310
Helix 37	AE1	J	951	974	Right-handed alpha
Helix 38	AE2	J	999	1004	Right-handed alpha
Helix 39	AE3	J	1006	1018	Right-handed alpha
Helix 40	AE4	J	1021	1025	Right-handed 310
Helix 41	AE5	K	951	956	Right-handed alpha
Helix 42	AE6	K	961	974	Right-handed alpha
Helix 43	AE7	K	998	1004	Right-handed alpha
Helix 44	AE8	K	1007	1018	Right-handed alpha
Helix 45	AE9	K	1021	1025	Right-handed 310
Helix 46	AF1	L	951	956	Right-handed alpha
Helix 47	AF2	L	961	974	Right-handed alpha
Helix 48	AF3	L	999	1004	Right-handed alpha
Helix 49	AF4	L	1006	1018	Right-handed alpha
Helix 50	AF5	L	1021	1025	Right-handed 310
Helix 51	AF6	M	951	956	Right-handed alpha
Helix 52	AF7	M	961	974	Right-handed alpha
Helix 53	AF8	M	999	1004	Right-handed alpha
Helix 54	AF9	M	1007	1018	Right-handed alpha
Helix 55	AG1	M	1021	1025	Right-handed 310
Helix 56	AG2	N	961	974	Right-handed alpha
Helix 57	AG3	N	999	1004	Right-handed alpha
Helix 58	AG4	N	1005	1018	Right-handed alpha
Helix 59	AG5	N	1021	1025	Right-handed 310
Helix 60	AG6	O	961	974	Right-handed alpha
Helix 61	AG7	O	999	1004	Right-handed alpha
Helix 62	AG8	O	1006	1018	Right-handed alpha
Helix 63	AG9	O	1021	1025	Right-handed 310
Helix 64	AH1	P	951	956	Right-handed alpha
Helix 65	AH2	P	961	973	Right-handed alpha
Helix 66	AH3	P	999	1004	Right-handed alpha
Helix 67	AH4	P	1006	1020	Right-handed alpha
Helix 68	AH5	P	1021	1025	Right-handed 310

There are 33 sheets in PDB entry 9NGW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	928	929	first strand
Strand 2	A	915	920	anti-parallel
Strand 3	A	898	902	anti-parallel
Strand 4	A	885	889	anti-parallel
Strand 5	A	868	873	anti-parallel
Strand 6	A	1036	1041	anti-parallel
Strand 7	A	932	935	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	877	878	first strand
Strand 2	A	1028	1031	anti-parallel
Strand 3	A	947	949	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	868	869	first strand
Strand 2	B	1038	1041	anti-parallel
Strand 3	B	928	935	anti-parallel
Strand 4	B	913	920	anti-parallel
Strand 5	B	898	904	anti-parallel
Strand 6	B	885	889	anti-parallel
Strand 7	B	871	873	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	877	878	first strand
Strand 2	B	1028	1031	anti-parallel
Strand 3	B	947	949	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	868	873	first strand
Strand 2	C	885	889	anti-parallel
Strand 3	C	898	904	anti-parallel
Strand 4	C	913	920	anti-parallel
Strand 5	C	928	935	anti-parallel
Strand 6	C	1036	1041	anti-parallel
Strand 7	C	868	873	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	877	878	first strand
Strand 2	C	1028	1031	anti-parallel
Strand 3	C	947	949	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	928	929	first strand
Strand 2	D	913	920	anti-parallel
Strand 3	D	933	935	anti-parallel
Strand 4	D	1036	1040	anti-parallel
Strand 5	D	868	873	anti-parallel
Strand 6	D	885	889	anti-parallel
Strand 7	D	898	904	anti-parallel
Strand 8	D	913	920	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	877	878	first strand
Strand 2	D	1028	1031	anti-parallel
Strand 3	D	947	949	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	928	929	first strand
Strand 2	E	915	920	anti-parallel
Strand 3	E	898	902	anti-parallel
Strand 4	E	885	889	anti-parallel
Strand 5	E	868	873	anti-parallel
Strand 6	E	1036	1041	anti-parallel
Strand 7	E	932	935	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	877	878	first strand
Strand 2	E	1028	1031	anti-parallel
Strand 3	E	947	949	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	868	873	first strand
Strand 2	F	885	889	anti-parallel
Strand 3	F	898	904	anti-parallel
Strand 4	F	913	920	anti-parallel
Strand 5	F	928	935	anti-parallel
Strand 6	F	1036	1041	anti-parallel
Strand 7	F	868	873	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	877	878	first strand
Strand 2	F	1028	1031	anti-parallel
Strand 3	F	947	949	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	868	873	first strand
Strand 2	G	885	889	anti-parallel
Strand 3	G	898	904	anti-parallel
Strand 4	G	913	920	anti-parallel
Strand 5	G	928	935	anti-parallel
Strand 6	G	1036	1041	anti-parallel
Strand 7	G	868	873	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	877	878	first strand
Strand 2	G	1028	1031	anti-parallel
Strand 3	G	947	949	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	943	944	first strand
Strand 2	H	912	920	anti-parallel
Strand 3	H	928	935	anti-parallel
Strand 4	H	1036	1041	anti-parallel
Strand 5	H	868	873	anti-parallel
Strand 6	H	885	889	anti-parallel
Strand 7	H	898	904	anti-parallel
Strand 8	H	912	920	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	877	878	first strand
Strand 2	H	1028	1031	anti-parallel
Strand 3	H	947	949	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	868	873	first strand
Strand 2	I	885	889	anti-parallel
Strand 3	I	898	902	anti-parallel
Strand 4	I	915	920	anti-parallel
Strand 5	I	932	935	anti-parallel
Strand 6	I	1036	1041	anti-parallel
Strand 7	I	868	873	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	877	878	first strand
Strand 2	I	1028	1031	anti-parallel
Strand 3	I	947	949	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	868	873	first strand
Strand 2	J	885	889	anti-parallel
Strand 3	J	898	904	anti-parallel
Strand 4	J	913	920	anti-parallel
Strand 5	J	928	935	anti-parallel
Strand 6	J	1036	1041	anti-parallel
Strand 7	J	868	873	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	877	878	first strand
Strand 2	J	1028	1031	anti-parallel
Strand 3	J	947	949	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	928	929	first strand
Strand 2	K	915	920	anti-parallel
Strand 3	K	898	902	anti-parallel
Strand 4	K	885	889	anti-parallel
Strand 5	K	868	873	anti-parallel
Strand 6	K	1036	1041	anti-parallel
Strand 7	K	932	935	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	877	878	first strand
Strand 2	K	1028	1031	anti-parallel
Strand 3	K	947	949	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	928	929	first strand
Strand 2	L	943	944	first strand
Strand 3	L	898	904	first strand
Strand 4	L	885	889	anti-parallel
Strand 5	L	868	873	anti-parallel
Strand 6	L	1036	1041	anti-parallel
Strand 7	L	932	935	anti-parallel
Strand 8	L	912	920	anti-parallel
Strand 9	L	943	944	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	877	878	first strand
Strand 2	L	1028	1031	anti-parallel
Strand 3	L	947	949	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	868	873	first strand
Strand 2	M	885	889	anti-parallel
Strand 3	M	898	902	anti-parallel
Strand 4	M	915	920	anti-parallel
Strand 5	M	928	935	anti-parallel
Strand 6	M	1036	1041	anti-parallel
Strand 7	M	868	873	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	877	878	first strand
Strand 2	M	1028	1031	anti-parallel
Strand 3	M	947	949	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	868	873	first strand
Strand 2	N	885	889	anti-parallel
Strand 3	N	898	904	anti-parallel
Strand 4	N	913	920	anti-parallel
Strand 5	N	928	935	anti-parallel
Strand 6	N	1036	1041	anti-parallel
Strand 7	N	868	873	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	877	878	first strand
Strand 2	N	1028	1031	anti-parallel
Strand 3	N	947	949	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	928	929	first strand
Strand 2	O	915	920	anti-parallel
Strand 3	O	898	902	anti-parallel
Strand 4	O	885	889	anti-parallel
Strand 5	O	868	873	anti-parallel
Strand 6	O	1036	1041	anti-parallel
Strand 7	O	932	935	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	877	878	first strand
Strand 2	O	1028	1031	anti-parallel
Strand 3	O	947	949	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	928	929	first strand
Strand 2	P	912	920	anti-parallel
Strand 3	P	898	904	anti-parallel
Strand 4	P	885	889	anti-parallel
Strand 5	P	868	873	anti-parallel
Strand 6	P	1036	1041	anti-parallel
Strand 7	P	932	935	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	928	929	first strand
Strand 2	P	912	920	anti-parallel
Strand 3	P	943	944	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	877	878	first strand
Strand 2	P	1028	1031	anti-parallel
Strand 3	P	947	949	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9NGW

Analysis of interatomic Contacts of Structural Units in PDB entry:
9NGW