Analysis of interatomic Contacts of Structural Units in PDB entry:
9NLZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9NLZ entry

There are 12 chains in PDB entry 9NLZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 18ALA 758
B
ASP 18ALA 758
C
ASP 18ALA 758
D
ASP 18ALA 758
E
ASP 18ALA 758
F
ASP 245ALA 758
G
MET 1ASP 290
H
MET 1ASP 289
I
MET 1LEU 292
J
SER 27TRP 86
K
GLY 169ARG 257
L
ILE 433ILE 650
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are238 helices in PDB entry 9NLZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
36 43Right-handed alpha
Helix 2
AA2
A
82 90Right-handed alpha
Helix 3
AA3
A
103 109Right-handed alpha
Helix 4
AA4
A
125 129Right-handed 310
Helix 5
AA5
A
135 147Right-handed alpha
Helix 6
AA6
A
245 256Right-handed alpha
Helix 7
AA7
A
262 270Right-handed alpha
Helix 8
AA8
A
286 297Right-handed alpha
Helix 9
AA9
A
309 311Right-handed 310
Helix 10
AB1
A
320 326Right-handed alpha
Helix 11
AB2
A
327 337Right-handed alpha
Helix 12
AB3
A
367 380Right-handed alpha
Helix 13
AB4
A
420 432Right-handed alpha
Helix 14
AB5
A
433 438Right-handed alpha
Helix 15
AB6
A
446 454Right-handed alpha
Helix 16
AB7
A
460 478Right-handed alpha
Helix 17
AB8
A
498 509Right-handed alpha
Helix 18
AB9
A
516 523Right-handed alpha
Helix 19
AC1
A
533 551Right-handed alpha
Helix 20
AC2
A
570 580Right-handed alpha
Helix 21
AC3
A
590 595Right-handed alpha
Helix 22
AC4
A
598 612Right-handed alpha
Helix 23
AC5
A
613 615Right-handed 310
Helix 24
AC6
A
640 651Right-handed alpha
Helix 25
AC7
A
669 677Right-handed alpha
Helix 26
AC8
A
694 705Right-handed alpha
Helix 27
AC9
A
708 723Right-handed alpha
Helix 28
AD1
A
729 743Right-handed alpha
Helix 29
AD2
A
745 758Right-handed alpha
Helix 30
AD3
B
36 43Right-handed alpha
Helix 31
AD4
B
82 90Right-handed alpha
Helix 32
AD5
B
103 109Right-handed alpha
Helix 33
AD6
B
125 129Right-handed 310
Helix 34
AD7
B
136 147Right-handed alpha
Helix 35
AD8
B
235 239Right-handed 310
Helix 36
AD9
B
245 255Right-handed alpha
Helix 37
AE1
B
262 270Right-handed alpha
Helix 38
AE2
B
287 295Right-handed alpha
Helix 39
AE3
B
320 325Right-handed alpha
Helix 40
AE4
B
327 337Right-handed alpha
Helix 41
AE5
B
351 354Right-handed 310
Helix 42
AE6
B
366 380Right-handed alpha
Helix 43
AE7
B
396 400Right-handed 310
Helix 44
AE8
B
402 406Right-handed 310
Helix 45
AE9
B
420 432Right-handed alpha
Helix 46
AF1
B
446 454Right-handed alpha
Helix 47
AF2
B
458 478Right-handed alpha
Helix 48
AF3
B
491 495Right-handed 310
Helix 49
AF4
B
498 506Right-handed alpha
Helix 50
AF5
B
516 523Right-handed alpha
Helix 51
AF6
B
532 551Right-handed alpha
Helix 52
AF7
B
569 580Right-handed alpha
Helix 53
AF8
B
598 613Right-handed alpha
Helix 54
AF9
B
640 651Right-handed alpha
Helix 55
AG1
B
669 677Right-handed alpha
Helix 56
AG2
B
678 682Right-handed 310
Helix 57
AG3
B
693 705Right-handed alpha
Helix 58
AG4
B
709 723Right-handed alpha
Helix 59
AG5
B
729 743Right-handed alpha
Helix 60
AG6
B
747 758Right-handed alpha
Helix 61
AG7
C
36 43Right-handed alpha
Helix 62
AG8
C
82 90Right-handed alpha
Helix 63
AG9
C
103 109Right-handed alpha
Helix 64
AH1
C
125 129Right-handed 310
Helix 65
AH2
C
135 147Right-handed alpha
Helix 66
AH3
C
245 255Right-handed alpha
Helix 67
AH4
C
262 269Right-handed alpha
Helix 68
AH5
C
286 296Right-handed alpha
Helix 69
AH6
C
318 325Right-handed alpha
Helix 70
AH7
C
327 337Right-handed alpha
Helix 71
AH8
C
350 354Right-handed 310
Helix 72
AH9
C
369 380Right-handed alpha
Helix 73
AI1
C
401 405Right-handed 310
Helix 74
AI2
C
420 432Right-handed alpha
Helix 75
AI3
C
433 438Right-handed alpha
Helix 76
AI4
C
446 454Right-handed alpha
Helix 77
AI5
C
458 476Right-handed alpha
Helix 78
AI6
C
489 493Right-handed 310
Helix 79
AI7
C
498 506Right-handed alpha
Helix 80
AI8
C
514 523Right-handed alpha
Helix 81
AI9
C
533 552Right-handed alpha
Helix 82
AJ1
C
569 582Right-handed alpha
Helix 83
AJ2
C
591 595Right-handed 310
Helix 84
AJ3
C
598 613Right-handed alpha
Helix 85
AJ4
C
625 630Right-handed alpha
Helix 86
AJ5
C
640 651Right-handed alpha
Helix 87
AJ6
C
669 677Right-handed alpha
Helix 88
AJ7
C
694 705Right-handed alpha
Helix 89
AJ8
C
708 722Right-handed alpha
Helix 90
AJ9
C
729 741Right-handed alpha
Helix 91
AK1
C
748 758Right-handed alpha
Helix 92
AK2
D
36 43Right-handed alpha
Helix 93
AK3
D
82 90Right-handed alpha
Helix 94
AK4
D
103 109Right-handed alpha
Helix 95
AK5
D
125 129Right-handed 310
Helix 96
AK6
D
135 147Right-handed alpha
Helix 97
AK7
D
235 239Right-handed 310
Helix 98
AK8
D
246 255Right-handed alpha
Helix 99
AK9
D
256 259Right-handed 310
Helix 100
AL1
D
262 270Right-handed alpha
Helix 101
AL2
D
288 297Right-handed alpha
Helix 102
AL3
D
318 323Right-handed alpha
Helix 103
AL4
D
327 338Right-handed alpha
Helix 104
AL5
D
339 341Right-handed 310
Helix 105
AL6
D
350 354Right-handed 310
Helix 106
AL7
D
366 380Right-handed alpha
Helix 107
AL8
D
401 406Right-handed 310
Helix 108
AL9
D
420 432Right-handed alpha
Helix 109
AM1
D
433 438Right-handed alpha
Helix 110
AM2
D
446 454Right-handed alpha
Helix 111
AM3
D
461 479Right-handed alpha
Helix 112
AM4
D
488 493Right-handed alpha
Helix 113
AM5
D
498 506Right-handed alpha
Helix 114
AM6
D
516 523Right-handed alpha
Helix 115
AM7
D
533 552Right-handed alpha
Helix 116
AM8
D
569 580Right-handed alpha
Helix 117
AM9
D
590 595Right-handed alpha
Helix 118
AN1
D
598 612Right-handed alpha
Helix 119
AN2
D
625 630Right-handed alpha
Helix 120
AN3
D
640 651Right-handed alpha
Helix 121
AN4
D
669 677Right-handed alpha
Helix 122
AN5
D
678 682Right-handed 310
Helix 123
AN6
D
693 705Right-handed alpha
Helix 124
AN7
D
708 722Right-handed alpha
Helix 125
AN8
D
729 744Right-handed alpha
Helix 126
AN9
D
746 758Right-handed alpha
Helix 127
AO1
E
36 43Right-handed alpha
Helix 128
AO2
E
82 90Right-handed alpha
Helix 129
AO3
E
103 109Right-handed alpha
Helix 130
AO4
E
125 129Right-handed 310
Helix 131
AO5
E
135 147Right-handed alpha
Helix 132
AO6
E
245 256Right-handed alpha
Helix 133
AO7
E
257 260Right-handed 310
Helix 134
AO8
E
262 270Right-handed alpha
Helix 135
AO9
E
286 298Right-handed alpha
Helix 136
AP1
E
309 311Right-handed 310
Helix 137
AP2
E
317 324Right-handed alpha
Helix 138
AP3
E
327 338Right-handed alpha
Helix 139
AP4
E
339 341Right-handed 310
Helix 140
AP5
E
350 354Right-handed 310
Helix 141
AP6
E
366 381Right-handed alpha
Helix 142
AP7
E
396 400Right-handed 310
Helix 143
AP8
E
401 405Right-handed 310
Helix 144
AP9
E
420 438Right-handed alpha
Helix 145
AQ1
E
446 454Right-handed alpha
Helix 146
AQ2
E
458 475Right-handed alpha
Helix 147
AQ3
E
498 509Right-handed alpha
Helix 148
AQ4
E
518 524Right-handed alpha
Helix 149
AQ5
E
532 552Right-handed alpha
Helix 150
AQ6
E
570 582Right-handed alpha
Helix 151
AQ7
E
590 595Right-handed alpha
Helix 152
AQ8
E
598 614Right-handed alpha
Helix 153
AQ9
E
625 630Right-handed alpha
Helix 154
AR1
E
640 651Right-handed alpha
Helix 155
AR2
E
669 677Right-handed alpha
Helix 156
AR3
E
678 682Right-handed 310
Helix 157
AR4
E
693 705Right-handed alpha
Helix 158
AR5
E
708 723Right-handed alpha
Helix 159
AR6
E
730 744Right-handed alpha
Helix 160
AR7
E
748 758Right-handed alpha
Helix 161
AR8
F
246 255Right-handed alpha
Helix 162
AR9
F
257 261Right-handed 310
Helix 163
AS1
F
262 270Right-handed alpha
Helix 164
AS2
F
286 298Right-handed alpha
Helix 165
AS3
F
321 327Right-handed alpha
Helix 166
AS4
F
327 337Right-handed alpha
Helix 167
AS5
F
373 380Right-handed alpha
Helix 168
AS6
F
421 438Right-handed alpha
Helix 169
AS7
F
446 454Right-handed alpha
Helix 170
AS8
F
458 478Right-handed alpha
Helix 171
AS9
F
491 495Right-handed 310
Helix 172
AT1
F
498 506Right-handed alpha
Helix 173
AT2
F
518 523Right-handed alpha
Helix 174
AT3
F
532 552Right-handed alpha
Helix 175
AT4
F
570 582Right-handed alpha
Helix 176
AT5
F
590 595Right-handed alpha
Helix 177
AT6
F
598 612Right-handed alpha
Helix 178
AT7
F
625 630Right-handed alpha
Helix 179
AT8
F
640 651Right-handed alpha
Helix 180
AT9
F
669 677Right-handed alpha
Helix 181
AU1
F
678 682Right-handed 310
Helix 182
AU2
F
693 705Right-handed alpha
Helix 183
AU3
F
708 721Right-handed alpha
Helix 184
AU4
F
729 744Right-handed alpha
Helix 185
AU5
F
746 757Right-handed alpha
Helix 186
AU6
G
3 15Right-handed alpha
Helix 187
AU7
G
19 25Right-handed 310
Helix 188
AU8
G
29 50Right-handed alpha
Helix 189
AU9
G
52 71Right-handed alpha
Helix 190
AV1
G
76 90Right-handed alpha
Helix 191
AV2
G
92 108Right-handed alpha
Helix 192
AV3
G
116 130Right-handed alpha
Helix 193
AV4
G
133 151Right-handed alpha
Helix 194
AV5
G
153 171Right-handed alpha
Helix 195
AV6
G
173 189Right-handed alpha
Helix 196
AV7
G
194 212Right-handed alpha
Helix 197
AV8
G
214 229Right-handed alpha
Helix 198
AV9
G
229 234Right-handed alpha
Helix 199
AW1
G
235 251Right-handed alpha
Helix 200
AW2
G
252 267Right-handed alpha
Helix 201
AW3
G
270 290Right-handed alpha
Helix 202
AW4
H
3 15Right-handed alpha
Helix 203
AW5
H
19 25Right-handed 310
Helix 204
AW6
H
29 50Right-handed alpha
Helix 205
AW7
H
52 71Right-handed alpha
Helix 206
AW8
H
72 91Right-handed alpha
Helix 207
AW9
H
92 110Right-handed alpha
Helix 208
AX1
H
112 130Right-handed alpha
Helix 209
AX2
H
133 151Right-handed alpha
Helix 210
AX3
H
153 171Right-handed alpha
Helix 211
AX4
H
173 189Right-handed alpha
Helix 212
AX5
H
198 212Right-handed alpha
Helix 213
AX6
H
214 229Right-handed alpha
Helix 214
AX7
H
229 234Right-handed alpha
Helix 215
AX8
H
235 251Right-handed alpha
Helix 216
AX9
H
252 267Right-handed alpha
Helix 217
AY1
H
270 289Right-handed alpha
Helix 218
AY2
I
3 15Right-handed alpha
Helix 219
AY3
I
19 25Right-handed 310
Helix 220
AY4
I
29 50Right-handed alpha
Helix 221
AY5
I
52 71Right-handed alpha
Helix 222
AY6
I
72 90Right-handed alpha
Helix 223
AY7
I
92 110Right-handed alpha
Helix 224
AY8
I
112 130Right-handed alpha
Helix 225
AY9
I
133 149Right-handed alpha
Helix 226
AZ1
I
155 171Right-handed alpha
Helix 227
AZ2
I
173 189Right-handed alpha
Helix 228
AZ3
I
198 212Right-handed alpha
Helix 229
AZ4
I
214 229Right-handed alpha
Helix 230
AZ5
I
229 234Right-handed alpha
Helix 231
AZ6
I
235 251Right-handed alpha
Helix 232
AZ7
I
252 267Right-handed alpha
Helix 233
AZ8
I
270 291Right-handed alpha
Helix 234
AZ9
J
28 86Right-handed alpha
Helix 235
BA1
K
188 257Right-handed alpha
Helix 236
BA2
L
434 472Right-handed alpha
Helix 237
BA3
L
477 499Right-handed alpha
Helix 238
BA4
L
590 650Right-handed alpha
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There are 28 sheets in PDB entry 9NLZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
45 47first strand
Strand 2
A
64 70parallel
Strand 3
A
57 60anti-parallel
Strand 4
A
96 101anti-parallel
Strand 5
A
27 32anti-parallel
Strand 6
A
78 80parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
157 162first strand
Strand 2
A
165 177anti-parallel
Strand 3
A
113 123anti-parallel
Strand 4
A
203 208parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
151 152first strand
Strand 2
A
196 197anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
304 307first strand
Strand 2
A
344 349parallel
Strand 3
A
388 394parallel
Strand 4
A
277 280parallel
Strand 5
A
412 415parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
586 589first strand
Strand 2
A
620 623parallel
Strand 3
A
661 667parallel
Strand 4
A
557 563parallel
Strand 5
A
684 687parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
45 47first strand
Strand 2
B
64 70parallel
Strand 3
B
57 60anti-parallel
Strand 4
B
96 101anti-parallel
Strand 5
B
27 32anti-parallel
Strand 6
B
78 80parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
157 162first strand
Strand 2
B
165 177anti-parallel
Strand 3
B
113 123anti-parallel
Strand 4
B
203 208parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
134 135first strand
Strand 2
B
216 217parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
151 152first strand
Strand 2
B
196 197anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
304 307first strand
Strand 2
B
344 349parallel
Strand 3
B
388 394parallel
Strand 4
B
277 280parallel
Strand 5
B
412 415parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
585 589first strand
Strand 2
B
619 623parallel
Strand 3
B
663 667parallel
Strand 4
B
561 563parallel
Strand 5
B
686 687parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
45 47first strand
Strand 2
C
64 70parallel
Strand 3
C
57 60anti-parallel
Strand 4
C
96 101anti-parallel
Strand 5
C
27 32anti-parallel
Strand 6
C
78 80parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
157 162first strand
Strand 2
C
165 177anti-parallel
Strand 3
C
113 123anti-parallel
Strand 4
C
203 208parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
151 152first strand
Strand 2
C
196 197anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
344 348first strand
Strand 2
C
388 394parallel
Strand 3
C
277 280parallel
Strand 4
C
412 415parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
586 589first strand
Strand 2
C
620 623parallel
Strand 3
C
661 667parallel
Strand 4
C
557 563parallel
Strand 5
C
684 687parallel
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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
45 47first strand
Strand 2
D
64 70parallel
Strand 3
D
57 60anti-parallel
Strand 4
D
96 101anti-parallel
Strand 5
D
27 32anti-parallel
Strand 6
D
78 80parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
157 162first strand
Strand 2
D
165 177anti-parallel
Strand 3
D
113 123anti-parallel
Strand 4
D
203 208parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
151 152first strand
Strand 2
D
196 197anti-parallel
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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
304 306first strand
Strand 2
D
344 348parallel
Strand 3
D
388 394parallel
Strand 4
D
277 280parallel
Strand 5
D
413 415parallel
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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
585 589first strand
Strand 2
D
618 623parallel
Strand 3
D
660 667parallel
Strand 4
D
557 563parallel
Strand 5
D
684 687parallel
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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
45 47first strand
Strand 2
E
64 70parallel
Strand 3
E
57 60anti-parallel
Strand 4
E
96 101anti-parallel
Strand 5
E
27 32anti-parallel
Strand 6
E
78 80parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
157 162first strand
Strand 2
E
165 177anti-parallel
Strand 3
E
113 123anti-parallel
Strand 4
E
203 208parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
151 152first strand
Strand 2
E
196 197anti-parallel
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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
304 307first strand
Strand 2
E
344 349parallel
Strand 3
E
388 394parallel
Strand 4
E
276 280parallel
Strand 5
E
412 415parallel
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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
585 589first strand
Strand 2
E
618 624parallel
Strand 3
E
660 667parallel
Strand 4
E
558 563parallel
Strand 5
E
684 687parallel
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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
304 307first strand
Strand 2
F
344 349parallel
Strand 3
F
388 394parallel
Strand 4
F
276 280parallel
Strand 5
F
412 415parallel
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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
585 589first strand
Strand 2
F
618 623parallel
Strand 3
F
660 667parallel
Strand 4
F
557 563parallel
Strand 5
F
684 687parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il