Analysis of interatomic Contacts of Structural Units in PDB entry:
9NM3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9NM3 entry

There are 2 chains in PDB entry 9NM3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 164THR 611
B
 C 1 G 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 9NM3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
167 171Right-handed 310
Helix 2
AA2
A
182 190Right-handed alpha
Helix 3
AA3
A
191 197Right-handed alpha
Helix 4
AA4
A
198 210Right-handed alpha
Helix 5
AA5
A
214 227Right-handed alpha
Helix 6
AA6
A
228 237Right-handed alpha
Helix 7
AA7
A
240 254Right-handed alpha
Helix 8
AA8
A
259 273Right-handed alpha
Helix 9
AA9
A
274 280Right-handed alpha
Helix 10
AB1
A
283 293Right-handed alpha
Helix 11
AB2
A
296 305Right-handed alpha
Helix 12
AB3
A
311 319Right-handed alpha
Helix 13
AB4
A
321 333Right-handed alpha
Helix 14
AB5
A
334 346Right-handed alpha
Helix 15
AB6
A
347 356Right-handed alpha
Helix 16
AB7
A
357 371Right-handed alpha
Helix 17
AB8
A
381 402Right-handed alpha
Helix 18
AB9
A
402 408Right-handed alpha
Helix 19
AC1
A
411 422Right-handed alpha
Helix 20
AC2
A
425 436Right-handed alpha
Helix 21
AC3
A
440 446Right-handed alpha
Helix 22
AC4
A
449 461Right-handed alpha
Helix 23
AC5
A
462 476Right-handed alpha
Helix 24
AC6
A
486 493Right-handed alpha
Helix 25
AC7
A
496 512Right-handed alpha
Helix 26
AC8
A
526 543Right-handed alpha
Helix 27
AC9
A
543 550Right-handed alpha
Helix 28
AD1
A
550 561Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9NM3.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
477 478first strand
Strand 2
A
609 610anti-parallel
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