Analysis of interatomic Contacts of Structural Units in PDB entry:
9NOX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9NOX entry

There are 5 chains in PDB entry 9NOX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLU 7PHE 250
C
 SER 2ASN 340
D
 ALA 7ASN 59
E
 GLN 1SER 128
A
 LEU 559ASP 839
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9NOX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
7 35Right-handed alpha
Helix 2
AA2
B
49 61Right-handed alpha
Helix 3
AA3
B
99 106Right-handed 310
Helix 4
AA4
B
121 134Right-handed alpha
Helix 5
AA5
B
149 160Right-handed alpha
Helix 6
AA6
B
163 168Right-handed alpha
Helix 7
AA7
B
169 172Right-handed 310
Helix 8
AA8
B
187 209Right-handed alpha
Helix 9
AA9
B
225 247Right-handed alpha
Helix 10
AB1
C
3 26Right-handed alpha
Helix 11
AB2
C
29 34Right-handed alpha
Helix 12
AB3
C
35 37Right-handed 310
Helix 13
AB4
D
8 23Right-handed alpha
Helix 14
AB5
D
29 44Right-handed alpha
Helix 15
AB6
D
45 48Right-handed 310
Helix 16
AB7
D
55 59Right-handed 310
Helix 17
AB8
E
28 32Right-handed 310
Helix 18
AB9
E
87 91Right-handed 310
Helix 19
AC1
A
563 590Right-handed alpha
Helix 20
AC2
A
593 600Right-handed alpha
Helix 21
AC3
A
601 617Right-handed alpha
Helix 22
AC4
A
617 622Right-handed alpha
Helix 23
AC5
A
626 636Right-handed alpha
Helix 24
AC6
A
636 660Right-handed alpha
Helix 25
AC7
A
665 675Right-handed alpha
Helix 26
AC8
A
676 699Right-handed alpha
Helix 27
AC9
A
725 747Right-handed alpha
Helix 28
AD1
A
748 750Right-handed 310
Helix 29
AD2
A
758 782Right-handed alpha
Helix 30
AD3
A
787 818Right-handed alpha
Helix 31
AD4
A
819 822Right-handed 310
Helix 32
AD5
A
823 836Right-handed alpha
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There are 10 sheets in PDB entry 9NOX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 79first strand
Strand 2
B
84 89anti-parallel
Strand 3
B
37 43parallel
Strand 4
B
109 115parallel
Strand 5
B
142 148parallel
Strand 6
B
215 219parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 52first strand
Strand 2
C
335 340anti-parallel
Strand 3
C
327 331anti-parallel
Strand 4
C
315 320anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 63first strand
Strand 2
C
69 74anti-parallel
Strand 3
C
78 83anti-parallel
Strand 4
C
88 94anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 105first strand
Strand 2
C
111 116anti-parallel
Strand 3
C
120 125anti-parallel
Strand 4
C
134 140anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
146 153first strand
Strand 2
C
156 161anti-parallel
Strand 3
C
165 170anti-parallel
Strand 4
C
175 181anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
191 192first strand
Strand 2
C
198 202anti-parallel
Strand 3
C
208 212anti-parallel
Strand 4
C
218 222anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
229 234first strand
Strand 2
C
240 245anti-parallel
Strand 3
C
250 254anti-parallel
Strand 4
C
259 264anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
273 278first strand
Strand 2
C
284 289anti-parallel
Strand 3
C
294 298anti-parallel
Strand 4
C
304 308anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 7first strand
Strand 2
E
17 25anti-parallel
Strand 3
E
78 84anti-parallel
Strand 4
E
68 73anti-parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
11 12first strand
Strand 2
E
122 126parallel
Strand 3
E
92 98anti-parallel
Strand 4
E
34 39anti-parallel
Strand 5
E
46 51anti-parallel
Strand 6
E
58 60anti-parallel
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