Analysis of interatomic Contacts of Structural Units in PDB entry:
9NOZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9NOZ entry

There are 4 chains in PDB entry 9NOZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 405THR 501
B
 LEU 405THR 501
C
 MET 1LYS 325
D
 MET 1CYS 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 9NOZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
35 50Right-handed alpha
Helix 2
AA2
C
56 63Right-handed alpha
Helix 3
AA3
C
70 88Right-handed alpha
Helix 4
AA4
C
89 101Right-handed alpha
Helix 5
AA5
C
106 126Right-handed alpha
Helix 6
AA6
C
126 140Right-handed alpha
Helix 7
AA7
C
150 165Right-handed alpha
Helix 8
AA8
C
169 173Right-handed 310
Helix 9
AA9
C
199 211Right-handed alpha
Helix 10
AB1
C
212 226Right-handed alpha
Helix 11
AB2
C
245 247Right-handed 310
Helix 12
AB3
C
248 278Right-handed alpha
Helix 13
AB4
C
284 296Right-handed alpha
Helix 14
AB5
C
301 309Right-handed alpha
Helix 15
AB6
C
314 318Right-handed 310
Helix 16
AB7
D
33 50Right-handed alpha
Helix 17
AB8
D
50 65Right-handed alpha
Helix 18
AB9
D
73 86Right-handed alpha
Helix 19
AC1
D
90 101Right-handed alpha
Helix 20
AC2
D
106 139Right-handed alpha
Helix 21
AC3
D
150 173Right-handed alpha
Helix 22
AC4
D
199 211Right-handed alpha
Helix 23
AC5
D
212 225Right-handed alpha
Helix 24
AC6
D
248 265Right-handed alpha
Helix 25
AC7
D
265 278Right-handed alpha
Helix 26
AC8
D
288 296Right-handed alpha
Helix 27
AC9
D
297 300Right-handed 310
Helix 28
AD1
D
301 309Right-handed alpha
Helix 29
AD2
D
316 323Right-handed alpha
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There are 5 sheets in PDB entry 9NOZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
422 423first strand
Strand 2
A
436 439anti-parallel
Strand 3
A
444 445anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
459 460first strand
Strand 2
A
465 466anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 5first strand
Strand 2
C
10 11anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
178 181first strand
Strand 2
C
186 189anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
179 181first strand
Strand 2
D
186 188anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il