Analysis of interatomic Contacts of Structural Units in PDB entry:
9NS2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9NS2 entry

There is 1 chain in PDB entry 9NS2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 7GLU 491
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 29 helices in PDB entry 9NS2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 30Right-handed alpha
Helix 2
AA2
A
42 50Right-handed alpha
Helix 3
AA3
A
65 81Right-handed alpha
Helix 4
AA4
A
136 143Right-handed alpha
Helix 5
AA5
A
146 150Right-handed 310
Helix 6
AA6
A
166 174Right-handed alpha
Helix 7
AA7
A
181 189Right-handed alpha
Helix 8
AA8
A
190 204Right-handed alpha
Helix 9
AA9
A
208 216Right-handed alpha
Helix 10
AB1
A
217 226Right-handed alpha
Helix 11
AB2
A
229 244Right-handed alpha
Helix 12
AB3
A
245 256Right-handed alpha
Helix 13
AB4
A
258 264Right-handed alpha
Helix 14
AB5
A
266 271Right-handed alpha
Helix 15
AB6
A
278 284Right-handed 310
Helix 16
AB7
A
285 298Right-handed alpha
Helix 17
AB8
A
298 303Right-handed alpha
Helix 18
AB9
A
305 319Right-handed alpha
Helix 19
AC1
A
320 322Right-handed 310
Helix 20
AC2
A
335 343Right-handed alpha
Helix 21
AC3
A
347 360Right-handed alpha
Helix 22
AC4
A
360 375Right-handed alpha
Helix 23
AC5
A
378 390Right-handed alpha
Helix 24
AC6
A
392 409Right-handed alpha
Helix 25
AC7
A
422 434Right-handed alpha
Helix 26
AC8
A
438 442Right-handed 310
Helix 27
AC9
A
447 456Right-handed alpha
Helix 28
AD1
A
460 477Right-handed alpha
Helix 29
AD2
A
481 491Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 9NS2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 91first strand
Strand 2
A
103 108anti-parallel
Strand 3
A
111 117anti-parallel
Strand 4
A
56 61parallel
Strand 5
A
38 41anti-parallel
Strand 6
A
152 154anti-parallel
Strand 7
A
159 161anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 176first strand
Strand 2
A
206 207parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 275first strand
Strand 2
A
325 328anti-parallel
Strand 3
A
331 334anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il