Analysis of interatomic Contacts of Structural Units in PDB entry:
9NS8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9NS8 entry

There are 10 chains in PDB entry 9NS8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 30PRO 144
B
 PRO 30PRO 144
C
 GLY 32ILE 148
D
 PRO 30ILE 148
E
 PRO 30PRO 147
F
 ASP 31PRO 144
G
 PRO 30ILE 148
H
 PRO 30PRO 144
I
 GLY 27THR 145
J
 GLY 32ILE 148
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 9NS8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
88 93Right-handed alpha
Helix 2
AA2
A
113 117Right-handed 310
Helix 3
AA3
B
113 117Right-handed 310
Helix 4
AA4
C
88 93Right-handed alpha
Helix 5
AA5
C
113 117Right-handed 310
Helix 6
AA6
D
113 117Right-handed 310
Helix 7
AA7
E
88 93Right-handed alpha
Helix 8
AA8
E
113 117Right-handed 310
Helix 9
AA9
F
76 80Right-handed 310
Helix 10
AB1
F
88 93Right-handed alpha
Helix 11
AB2
F
113 117Right-handed 310
Helix 12
AB3
G
88 93Right-handed alpha
Helix 13
AB4
G
113 117Right-handed 310
Helix 14
AB5
H
113 117Right-handed 310
Helix 15
AB6
I
88 93Right-handed alpha
Helix 16
AB7
I
113 117Right-handed 310
Helix 17
AB8
J
88 93Right-handed alpha
Helix 18
AB9
J
113 117Right-handed 310
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There are 20 sheets in PDB entry 9NS8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 38first strand
Strand 2
A
132 141parallel
Strand 3
A
118 126anti-parallel
Strand 4
A
58 65anti-parallel
Strand 5
A
68 74anti-parallel
Strand 6
A
84 87anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 47first strand
Strand 2
A
105 109anti-parallel
Strand 3
A
96 99anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 38first strand
Strand 2
B
132 141parallel
Strand 3
B
118 126anti-parallel
Strand 4
B
58 65anti-parallel
Strand 5
B
68 74anti-parallel
Strand 6
B
84 87anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 47first strand
Strand 2
B
105 109anti-parallel
Strand 3
B
96 99anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 38first strand
Strand 2
C
132 141parallel
Strand 3
C
118 126anti-parallel
Strand 4
C
58 65anti-parallel
Strand 5
C
68 74anti-parallel
Strand 6
C
84 87anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 47first strand
Strand 2
C
105 109anti-parallel
Strand 3
C
96 99anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
33 38first strand
Strand 2
D
132 141parallel
Strand 3
D
118 126anti-parallel
Strand 4
D
58 65anti-parallel
Strand 5
D
68 74anti-parallel
Strand 6
D
84 87anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
43 47first strand
Strand 2
D
105 109anti-parallel
Strand 3
D
96 99anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
33 38first strand
Strand 2
E
132 141parallel
Strand 3
E
118 126anti-parallel
Strand 4
E
58 65anti-parallel
Strand 5
E
68 74anti-parallel
Strand 6
E
84 87anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
43 47first strand
Strand 2
E
105 109anti-parallel
Strand 3
E
96 99anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
33 38first strand
Strand 2
F
132 141parallel
Strand 3
F
118 126anti-parallel
Strand 4
F
58 65anti-parallel
Strand 5
F
68 74anti-parallel
Strand 6
F
84 87anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
43 47first strand
Strand 2
F
105 109anti-parallel
Strand 3
F
96 99anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
33 38first strand
Strand 2
G
132 141parallel
Strand 3
G
118 126anti-parallel
Strand 4
G
58 65anti-parallel
Strand 5
G
68 74anti-parallel
Strand 6
G
84 87anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
43 47first strand
Strand 2
G
105 109anti-parallel
Strand 3
G
96 99anti-parallel
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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
33 38first strand
Strand 2
H
132 141parallel
Strand 3
H
118 126anti-parallel
Strand 4
H
58 65anti-parallel
Strand 5
H
68 74anti-parallel
Strand 6
H
84 87anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
43 47first strand
Strand 2
H
105 109anti-parallel
Strand 3
H
96 99anti-parallel
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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
33 38first strand
Strand 2
I
132 141parallel
Strand 3
I
118 126anti-parallel
Strand 4
I
58 65anti-parallel
Strand 5
I
68 74anti-parallel
Strand 6
I
84 87anti-parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
43 47first strand
Strand 2
I
105 109anti-parallel
Strand 3
I
96 99anti-parallel
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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
33 38first strand
Strand 2
J
132 141parallel
Strand 3
J
118 126anti-parallel
Strand 4
J
58 65anti-parallel
Strand 5
J
68 74anti-parallel
Strand 6
J
84 87anti-parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
43 47first strand
Strand 2
J
105 109anti-parallel
Strand 3
J
96 99anti-parallel
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