Analysis of interatomic Contacts of Structural Units in PDB entry:
9NSC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9NSC entry

There are 6 chains in PDB entry 9NSC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LEU 317
B
 MET 1LEU 317
C
 SER 2LEU 317
D
 SER 2LEU 317
E
 SER 2LEU 317
F
 SER 2LEU 317
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 9NSC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 17Right-handed alpha
Helix 2
AA2
A
19 28Right-handed alpha
Helix 3
AA3
A
40 67Right-handed alpha
Helix 4
AA4
A
71 83Right-handed alpha
Helix 5
AA5
A
83 93Right-handed alpha
Helix 6
AA6
A
95 106Right-handed alpha
Helix 7
AA7
A
111 137Right-handed alpha
Helix 8
AA8
A
202 213Right-handed alpha
Helix 9
AA9
A
286 290Right-handed 310
Helix 10
AB1
A
291 305Right-handed alpha
Helix 11
AB2
B
4 15Right-handed alpha
Helix 12
AB3
B
19 28Right-handed alpha
Helix 13
AB4
B
40 66Right-handed alpha
Helix 14
AB5
B
71 93Right-handed alpha
Helix 15
AB6
B
95 106Right-handed alpha
Helix 16
AB7
B
111 137Right-handed alpha
Helix 17
AB8
B
175 179Right-handed 310
Helix 18
AB9
B
202 213Right-handed alpha
Helix 19
AC1
B
286 288Right-handed 310
Helix 20
AC2
B
289 305Right-handed alpha
Helix 21
AC3
C
4 17Right-handed alpha
Helix 22
AC4
C
19 28Right-handed alpha
Helix 23
AC5
C
40 66Right-handed alpha
Helix 24
AC6
C
71 93Right-handed alpha
Helix 25
AC7
C
95 107Right-handed alpha
Helix 26
AC8
C
111 137Right-handed alpha
Helix 27
AC9
C
149 154Right-handed alpha
Helix 28
AD1
C
175 177Right-handed 310
Helix 29
AD2
C
204 213Right-handed alpha
Helix 30
AD3
C
259 262Right-handed 310
Helix 31
AD4
C
285 290Right-handed alpha
Helix 32
AD5
C
291 305Right-handed alpha
Helix 33
AD6
D
4 17Right-handed alpha
Helix 34
AD7
D
19 27Right-handed alpha
Helix 35
AD8
D
40 67Right-handed alpha
Helix 36
AD9
D
71 83Right-handed alpha
Helix 37
AE1
D
83 92Right-handed alpha
Helix 38
AE2
D
95 107Right-handed alpha
Helix 39
AE3
D
111 137Right-handed alpha
Helix 40
AE4
D
149 156Right-handed alpha
Helix 41
AE5
D
202 213Right-handed alpha
Helix 42
AE6
D
285 290Right-handed alpha
Helix 43
AE7
D
291 305Right-handed alpha
Helix 44
AE8
E
4 17Right-handed alpha
Helix 45
AE9
E
19 28Right-handed alpha
Helix 46
AF1
E
40 66Right-handed alpha
Helix 47
AF2
E
71 93Right-handed alpha
Helix 48
AF3
E
95 106Right-handed alpha
Helix 49
AF4
E
111 137Right-handed alpha
Helix 50
AF5
E
175 177Right-handed 310
Helix 51
AF6
E
202 211Right-handed alpha
Helix 52
AF7
E
287 290Right-handed 310
Helix 53
AF8
E
291 305Right-handed alpha
Helix 54
AF9
F
4 17Right-handed alpha
Helix 55
AG1
F
19 28Right-handed alpha
Helix 56
AG2
F
39 67Right-handed alpha
Helix 57
AG3
F
71 93Right-handed alpha
Helix 58
AG4
F
95 107Right-handed alpha
Helix 59
AG5
F
111 137Right-handed alpha
Helix 60
AG6
F
175 177Right-handed 310
Helix 61
AG7
F
202 213Right-handed alpha
Helix 62
AG8
F
288 305Right-handed alpha
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There are 8 sheets in PDB entry 9NSC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 245first strand
Strand 2
A
278 284anti-parallel
Strand 3
A
254 258anti-parallel
Strand 4
A
264 268anti-parallel
Strand 5
A
228 232anti-parallel
Strand 6
A
215 221anti-parallel
Strand 7
A
310 316anti-parallel
Strand 8
A
179 186anti-parallel
Strand 9
A
191 198anti-parallel
Strand 10
A
278 284anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
244 245first strand
Strand 2
B
278 284anti-parallel
Strand 3
B
254 258anti-parallel
Strand 4
B
264 268anti-parallel
Strand 5
B
228 231anti-parallel
Strand 6
B
215 221anti-parallel
Strand 7
B
310 316anti-parallel
Strand 8
B
180 187anti-parallel
Strand 9
B
191 197anti-parallel
Strand 10
B
278 284anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
244 246first strand
Strand 2
C
277 284anti-parallel
Strand 3
C
254 258anti-parallel
Strand 4
C
264 268anti-parallel
Strand 5
C
228 231anti-parallel
Strand 6
C
215 221anti-parallel
Strand 7
C
310 316anti-parallel
Strand 8
C
179 187anti-parallel
Strand 9
C
191 198anti-parallel
Strand 10
C
277 284anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
244 246first strand
Strand 2
D
277 284anti-parallel
Strand 3
D
254 258anti-parallel
Strand 4
D
264 268anti-parallel
Strand 5
D
229 232anti-parallel
Strand 6
D
215 221anti-parallel
Strand 7
D
311 316anti-parallel
Strand 8
D
180 187anti-parallel
Strand 9
D
191 197anti-parallel
Strand 10
D
277 284anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
215 218first strand
Strand 2
E
311 316anti-parallel
Strand 3
E
179 187anti-parallel
Strand 4
E
191 198anti-parallel
Strand 5
E
277 284anti-parallel
Strand 6
E
254 258anti-parallel
Strand 7
E
264 272anti-parallel
Strand 8
E
226 232anti-parallel
Strand 9
E
220 221anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
215 218first strand
Strand 2
E
311 316anti-parallel
Strand 3
E
179 187anti-parallel
Strand 4
E
191 198anti-parallel
Strand 5
E
277 284anti-parallel
Strand 6
E
244 246anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
215 218first strand
Strand 2
F
311 316anti-parallel
Strand 3
F
179 185anti-parallel
Strand 4
F
192 198anti-parallel
Strand 5
F
277 284anti-parallel
Strand 6
F
254 258anti-parallel
Strand 7
F
264 268anti-parallel
Strand 8
F
228 232anti-parallel
Strand 9
F
220 221anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
215 218first strand
Strand 2
F
311 316anti-parallel
Strand 3
F
179 185anti-parallel
Strand 4
F
192 198anti-parallel
Strand 5
F
277 284anti-parallel
Strand 6
F
244 246anti-parallel
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