Analysis of interatomic Contacts of Structural Units in PDB entry:
9NSW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9NSW entry

There are 2 chains in PDB entry 9NSW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 27PHE 81
A
 MET 83ILE 273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 9NSW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 47Right-handed alpha
Helix 2
AA2
A
67 73Right-handed 310
Helix 3
AA3
A
77 80Right-handed 310
Helix 4
AA4
A
81 92Right-handed alpha
Helix 5
AA5
A
110 114Right-handed 310
Helix 6
AA6
A
118 126Right-handed alpha
Helix 7
AA7
A
127 139Right-handed alpha
Helix 8
AA8
A
139 151Right-handed alpha
Helix 9
AA9
A
173 186Right-handed alpha
Helix 10
AB1
A
192 203Right-handed alpha
Helix 11
AB2
A
257 270Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9NSW.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 65first strand
Strand 2
A
51 57anti-parallel
Strand 3
A
241 250anti-parallel
Strand 4
A
226 235anti-parallel
Strand 5
A
211 220anti-parallel
Strand 6
A
204 208anti-parallel
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