Analysis of interatomic Contacts of Structural Units in PDB entry:
9NUE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9NUE entry

There are 7 chains in PDB entry 9NUE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 239	ALA 758
B	LEU 239	ALA 758
C	LEU 239	ALA 758
D	LEU 239	ALA 758
E	LEU 239	ALA 758
F	LEU 239	ALA 758
G	ARG 424	ALA 758

There are185 helices in PDB entry 9NUE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	245	256	Right-handed alpha
Helix 2	AA2	A	257	260	Right-handed 310
Helix 3	AA3	A	262	270	Right-handed alpha
Helix 4	AA4	A	286	298	Right-handed alpha
Helix 5	AA5	A	308	314	Right-handed alpha
Helix 6	AA6	A	315	327	Right-handed alpha
Helix 7	AA7	A	327	338	Right-handed alpha
Helix 8	AA8	A	351	356	Right-handed alpha
Helix 9	AA9	A	369	381	Right-handed alpha
Helix 10	AB1	A	396	400	Right-handed 310
Helix 11	AB2	A	401	405	Right-handed 310
Helix 12	AB3	A	420	438	Right-handed alpha
Helix 13	AB4	A	446	454	Right-handed alpha
Helix 14	AB5	A	458	476	Right-handed alpha
Helix 15	AB6	A	498	507	Right-handed alpha
Helix 16	AB7	A	516	522	Right-handed alpha
Helix 17	AB8	A	532	551	Right-handed alpha
Helix 18	AB9	A	569	582	Right-handed alpha
Helix 19	AC1	A	590	595	Right-handed alpha
Helix 20	AC2	A	598	613	Right-handed alpha
Helix 21	AC3	A	625	630	Right-handed alpha
Helix 22	AC4	A	640	651	Right-handed alpha
Helix 23	AC5	A	669	677	Right-handed alpha
Helix 24	AC6	A	693	704	Right-handed alpha
Helix 25	AC7	A	708	723	Right-handed alpha
Helix 26	AC8	A	729	740	Right-handed alpha
Helix 27	AC9	A	745	758	Right-handed alpha
Helix 28	AD1	B	244	256	Right-handed alpha
Helix 29	AD2	B	256	261	Right-handed alpha
Helix 30	AD3	B	262	270	Right-handed alpha
Helix 31	AD4	B	286	298	Right-handed alpha
Helix 32	AD5	B	308	314	Right-handed alpha
Helix 33	AD6	B	315	327	Right-handed alpha
Helix 34	AD7	B	327	338	Right-handed alpha
Helix 35	AD8	B	339	341	Right-handed 310
Helix 36	AD9	B	350	355	Right-handed 310
Helix 37	AE1	B	369	381	Right-handed alpha
Helix 38	AE2	B	401	406	Right-handed 310
Helix 39	AE3	B	420	437	Right-handed alpha
Helix 40	AE4	B	446	454	Right-handed alpha
Helix 41	AE5	B	458	475	Right-handed alpha
Helix 42	AE6	B	476	478	Right-handed 310
Helix 43	AE7	B	498	506	Right-handed alpha
Helix 44	AE8	B	516	522	Right-handed alpha
Helix 45	AE9	B	532	551	Right-handed alpha
Helix 46	AF1	B	569	582	Right-handed alpha
Helix 47	AF2	B	590	595	Right-handed 310
Helix 48	AF3	B	598	614	Right-handed alpha
Helix 49	AF4	B	625	630	Right-handed alpha
Helix 50	AF5	B	640	651	Right-handed alpha
Helix 51	AF6	B	669	676	Right-handed alpha
Helix 52	AF7	B	678	682	Right-handed 310
Helix 53	AF8	B	693	705	Right-handed alpha
Helix 54	AF9	B	708	723	Right-handed alpha
Helix 55	AG1	B	729	742	Right-handed alpha
Helix 56	AG2	B	745	758	Right-handed alpha
Helix 57	AG3	C	247	256	Right-handed alpha
Helix 58	AG4	C	257	260	Right-handed 310
Helix 59	AG5	C	262	270	Right-handed alpha
Helix 60	AG6	C	286	299	Right-handed alpha
Helix 61	AG7	C	308	314	Right-handed alpha
Helix 62	AG8	C	315	327	Right-handed alpha
Helix 63	AG9	C	327	338	Right-handed alpha
Helix 64	AH1	C	339	341	Right-handed 310
Helix 65	AH2	C	351	356	Right-handed 310
Helix 66	AH3	C	369	381	Right-handed alpha
Helix 67	AH4	C	401	405	Right-handed 310
Helix 68	AH5	C	420	438	Right-handed alpha
Helix 69	AH6	C	446	454	Right-handed alpha
Helix 70	AH7	C	458	476	Right-handed alpha
Helix 71	AH8	C	491	495	Right-handed 310
Helix 72	AH9	C	498	506	Right-handed alpha
Helix 73	AI1	C	516	523	Right-handed alpha
Helix 74	AI2	C	532	549	Right-handed alpha
Helix 75	AI3	C	569	580	Right-handed alpha
Helix 76	AI4	C	590	595	Right-handed alpha
Helix 77	AI5	C	598	613	Right-handed alpha
Helix 78	AI6	C	625	630	Right-handed alpha
Helix 79	AI7	C	640	651	Right-handed alpha
Helix 80	AI8	C	669	677	Right-handed alpha
Helix 81	AI9	C	693	704	Right-handed alpha
Helix 82	AJ1	C	708	723	Right-handed alpha
Helix 83	AJ2	C	729	742	Right-handed alpha
Helix 84	AJ3	C	745	758	Right-handed alpha
Helix 85	AJ4	D	245	256	Right-handed alpha
Helix 86	AJ5	D	256	261	Right-handed alpha
Helix 87	AJ6	D	262	270	Right-handed alpha
Helix 88	AJ7	D	286	298	Right-handed alpha
Helix 89	AJ8	D	308	314	Right-handed alpha
Helix 90	AJ9	D	315	327	Right-handed alpha
Helix 91	AK1	D	327	338	Right-handed alpha
Helix 92	AK2	D	339	341	Right-handed 310
Helix 93	AK3	D	351	356	Right-handed alpha
Helix 94	AK4	D	369	381	Right-handed alpha
Helix 95	AK5	D	401	405	Right-handed 310
Helix 96	AK6	D	420	437	Right-handed alpha
Helix 97	AK7	D	446	454	Right-handed alpha
Helix 98	AK8	D	458	476	Right-handed alpha
Helix 99	AK9	D	498	506	Right-handed alpha
Helix 100	AL1	D	516	522	Right-handed alpha
Helix 101	AL2	D	532	551	Right-handed alpha
Helix 102	AL3	D	569	580	Right-handed alpha
Helix 103	AL4	D	598	613	Right-handed alpha
Helix 104	AL5	D	625	630	Right-handed alpha
Helix 105	AL6	D	640	651	Right-handed alpha
Helix 106	AL7	D	669	677	Right-handed alpha
Helix 107	AL8	D	693	705	Right-handed alpha
Helix 108	AL9	D	708	723	Right-handed alpha
Helix 109	AM1	D	729	742	Right-handed alpha
Helix 110	AM2	D	745	758	Right-handed alpha
Helix 111	AM3	E	246	256	Right-handed alpha
Helix 112	AM4	E	256	261	Right-handed alpha
Helix 113	AM5	E	262	270	Right-handed alpha
Helix 114	AM6	E	286	299	Right-handed alpha
Helix 115	AM7	E	308	314	Right-handed alpha
Helix 116	AM8	E	315	327	Right-handed alpha
Helix 117	AM9	E	327	338	Right-handed alpha
Helix 118	AN1	E	339	341	Right-handed 310
Helix 119	AN2	E	351	356	Right-handed alpha
Helix 120	AN3	E	369	381	Right-handed alpha
Helix 121	AN4	E	396	400	Right-handed 310
Helix 122	AN5	E	401	406	Right-handed 310
Helix 123	AN6	E	420	437	Right-handed alpha
Helix 124	AN7	E	446	454	Right-handed alpha
Helix 125	AN8	E	458	476	Right-handed alpha
Helix 126	AN9	E	491	495	Right-handed 310
Helix 127	AO1	E	498	506	Right-handed alpha
Helix 128	AO2	E	516	522	Right-handed alpha
Helix 129	AO3	E	532	551	Right-handed alpha
Helix 130	AO4	E	569	582	Right-handed alpha
Helix 131	AO5	E	598	613	Right-handed alpha
Helix 132	AO6	E	625	630	Right-handed alpha
Helix 133	AO7	E	640	651	Right-handed alpha
Helix 134	AO8	E	669	676	Right-handed alpha
Helix 135	AO9	E	693	705	Right-handed alpha
Helix 136	AP1	E	708	723	Right-handed alpha
Helix 137	AP2	E	729	742	Right-handed alpha
Helix 138	AP3	E	745	758	Right-handed alpha
Helix 139	AP4	F	244	255	Right-handed alpha
Helix 140	AP5	F	256	261	Right-handed alpha
Helix 141	AP6	F	262	270	Right-handed alpha
Helix 142	AP7	F	286	299	Right-handed alpha
Helix 143	AP8	F	308	314	Right-handed alpha
Helix 144	AP9	F	315	327	Right-handed alpha
Helix 145	AQ1	F	327	338	Right-handed alpha
Helix 146	AQ2	F	339	341	Right-handed 310
Helix 147	AQ3	F	351	356	Right-handed alpha
Helix 148	AQ4	F	369	381	Right-handed alpha
Helix 149	AQ5	F	396	400	Right-handed 310
Helix 150	AQ6	F	401	405	Right-handed 310
Helix 151	AQ7	F	420	437	Right-handed alpha
Helix 152	AQ8	F	446	454	Right-handed alpha
Helix 153	AQ9	F	458	476	Right-handed alpha
Helix 154	AR1	F	491	495	Right-handed 310
Helix 155	AR2	F	498	507	Right-handed alpha
Helix 156	AR3	F	516	525	Right-handed alpha
Helix 157	AR4	F	532	551	Right-handed alpha
Helix 158	AR5	F	569	580	Right-handed alpha
Helix 159	AR6	F	590	595	Right-handed alpha
Helix 160	AR7	F	598	612	Right-handed alpha
Helix 161	AR8	F	613	615	Right-handed 310
Helix 162	AR9	F	627	631	Right-handed 310
Helix 163	AS1	F	641	651	Right-handed alpha
Helix 164	AS2	F	669	677	Right-handed alpha
Helix 165	AS3	F	678	682	Right-handed 310
Helix 166	AS4	F	693	705	Right-handed alpha
Helix 167	AS5	F	708	723	Right-handed alpha
Helix 168	AS6	F	729	742	Right-handed alpha
Helix 169	AS7	F	745	758	Right-handed alpha
Helix 170	AS8	G	425	437	Right-handed alpha
Helix 171	AS9	G	446	454	Right-handed alpha
Helix 172	AT1	G	458	477	Right-handed alpha
Helix 173	AT2	G	499	506	Right-handed alpha
Helix 174	AT3	G	516	522	Right-handed alpha
Helix 175	AT4	G	532	551	Right-handed alpha
Helix 176	AT5	G	569	580	Right-handed alpha
Helix 177	AT6	G	590	595	Right-handed alpha
Helix 178	AT7	G	598	613	Right-handed alpha
Helix 179	AT8	G	625	630	Right-handed alpha
Helix 180	AT9	G	640	651	Right-handed alpha
Helix 181	AU1	G	669	676	Right-handed alpha
Helix 182	AU2	G	693	704	Right-handed alpha
Helix 183	AU3	G	708	723	Right-handed alpha
Helix 184	AU4	G	729	742	Right-handed alpha
Helix 185	AU5	G	745	758	Right-handed alpha

There are 14 sheets in PDB entry 9NUE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	304	307	first strand
Strand 2	A	344	349	parallel
Strand 3	A	388	394	parallel
Strand 4	A	276	280	parallel
Strand 5	A	412	415	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	585	589	first strand
Strand 2	A	618	623	parallel
Strand 3	A	660	667	parallel
Strand 4	A	557	563	parallel
Strand 5	A	684	687	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	304	307	first strand
Strand 2	B	344	349	parallel
Strand 3	B	388	394	parallel
Strand 4	B	276	280	parallel
Strand 5	B	413	415	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	587	589	first strand
Strand 2	B	618	623	parallel
Strand 3	B	660	667	parallel
Strand 4	B	557	563	parallel
Strand 5	B	684	687	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	304	307	first strand
Strand 2	C	344	349	parallel
Strand 3	C	388	394	parallel
Strand 4	C	278	280	parallel
Strand 5	C	413	415	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	557	559	first strand
Strand 2	C	660	667	parallel
Strand 3	C	618	623	parallel
Strand 4	C	587	589	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	557	559	first strand
Strand 2	C	660	667	parallel
Strand 3	C	562	563	parallel
Strand 4	C	686	687	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	304	307	first strand
Strand 2	D	344	349	parallel
Strand 3	D	388	394	parallel
Strand 4	D	276	280	parallel
Strand 5	D	412	415	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	587	589	first strand
Strand 2	D	620	623	parallel
Strand 3	D	662	667	parallel
Strand 4	D	558	563	parallel
Strand 5	D	684	687	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	304	307	first strand
Strand 2	E	344	349	parallel
Strand 3	E	388	394	parallel
Strand 4	E	277	280	parallel
Strand 5	E	412	415	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	586	589	first strand
Strand 2	E	618	623	parallel
Strand 3	E	660	667	parallel
Strand 4	E	557	563	parallel
Strand 5	E	684	687	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	304	307	first strand
Strand 2	F	344	349	parallel
Strand 3	F	388	394	parallel
Strand 4	F	277	280	parallel
Strand 5	F	412	415	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	585	589	first strand
Strand 2	F	618	623	parallel
Strand 3	F	660	666	parallel
Strand 4	F	557	563	parallel
Strand 5	F	684	687	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	587	589	first strand
Strand 2	G	618	623	parallel
Strand 3	G	660	667	parallel
Strand 4	G	557	563	parallel
Strand 5	G	685	687	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9NUE

Analysis of interatomic Contacts of Structural Units in PDB entry:
9NUE