Analysis of interatomic Contacts of Structural Units in PDB entry:
9NUF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9NUF entry

There are 15 chains in PDB entry 9NUF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	ASP 3	SER 400
E	ASP 3	SER 400
F	ASP 3	SER 400
G	ASP 3	SER 400
H	ASP 3	SER 400
I	ASP 3	SER 400
J	ASP 3	SER 400
K	ASP 3	SER 400
L	ASP 3	SER 400
M	ASP 3	SER 400
N	ASP 3	SER 400
O	ASP 3	SER 400
P	ASP 3	SER 400
Q	ASP 3	SER 400
Z	U 3	U 86

There are307 helices in PDB entry 9NUF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	3	17	Right-handed alpha
Helix 2	AA2	D	25	29	Right-handed 310
Helix 3	AA3	D	44	61	Right-handed alpha
Helix 4	AA4	D	65	78	Right-handed alpha
Helix 5	AA5	D	83	91	Right-handed alpha
Helix 6	AA6	D	121	140	Right-handed alpha
Helix 7	AA7	D	148	153	Right-handed alpha
Helix 8	AA8	D	157	176	Right-handed alpha
Helix 9	AA9	D	186	200	Right-handed alpha
Helix 10	AB1	D	204	208	Right-handed 310
Helix 11	AB2	D	210	224	Right-handed alpha
Helix 12	AB3	D	224	240	Right-handed alpha
Helix 13	AB4	D	246	260	Right-handed alpha
Helix 14	AB5	D	264	275	Right-handed alpha
Helix 15	AB6	D	279	286	Right-handed 310
Helix 16	AB7	D	287	305	Right-handed alpha
Helix 17	AB8	D	306	311	Right-handed 310
Helix 18	AB9	D	317	321	Right-handed 310
Helix 19	AC1	D	323	326	Right-handed 310
Helix 20	AC2	D	327	342	Right-handed alpha
Helix 21	AC3	D	356	369	Right-handed alpha
Helix 22	AC4	D	385	400	Right-handed alpha
Helix 23	AC5	E	4	17	Right-handed alpha
Helix 24	AC6	E	25	29	Right-handed 310
Helix 25	AC7	E	44	61	Right-handed alpha
Helix 26	AC8	E	65	78	Right-handed alpha
Helix 27	AC9	E	83	91	Right-handed alpha
Helix 28	AD1	E	121	140	Right-handed alpha
Helix 29	AD2	E	148	153	Right-handed alpha
Helix 30	AD3	E	157	176	Right-handed alpha
Helix 31	AD4	E	177	179	Right-handed 310
Helix 32	AD5	E	186	200	Right-handed alpha
Helix 33	AD6	E	204	208	Right-handed 310
Helix 34	AD7	E	210	224	Right-handed alpha
Helix 35	AD8	E	225	240	Right-handed alpha
Helix 36	AD9	E	246	260	Right-handed alpha
Helix 37	AE1	E	264	273	Right-handed alpha
Helix 38	AE2	E	279	286	Right-handed 310
Helix 39	AE3	E	287	305	Right-handed alpha
Helix 40	AE4	E	306	311	Right-handed 310
Helix 41	AE5	E	317	326	Right-handed 310
Helix 42	AE6	E	327	342	Right-handed alpha
Helix 43	AE7	E	356	369	Right-handed alpha
Helix 44	AE8	E	385	400	Right-handed alpha
Helix 45	AE9	F	4	17	Right-handed alpha
Helix 46	AF1	F	25	29	Right-handed 310
Helix 47	AF2	F	44	61	Right-handed alpha
Helix 48	AF3	F	65	78	Right-handed alpha
Helix 49	AF4	F	83	91	Right-handed alpha
Helix 50	AF5	F	121	140	Right-handed alpha
Helix 51	AF6	F	148	153	Right-handed alpha
Helix 52	AF7	F	157	176	Right-handed alpha
Helix 53	AF8	F	177	179	Right-handed 310
Helix 54	AF9	F	186	200	Right-handed alpha
Helix 55	AG1	F	204	208	Right-handed 310
Helix 56	AG2	F	210	224	Right-handed alpha
Helix 57	AG3	F	224	240	Right-handed alpha
Helix 58	AG4	F	246	260	Right-handed alpha
Helix 59	AG5	F	264	273	Right-handed alpha
Helix 60	AG6	F	279	283	Right-handed 310
Helix 61	AG7	F	284	305	Right-handed alpha
Helix 62	AG8	F	306	311	Right-handed 310
Helix 63	AG9	F	317	326	Right-handed 310
Helix 64	AH1	F	327	342	Right-handed alpha
Helix 65	AH2	F	356	369	Right-handed alpha
Helix 66	AH3	F	385	400	Right-handed alpha
Helix 67	AH4	G	4	17	Right-handed alpha
Helix 68	AH5	G	25	29	Right-handed 310
Helix 69	AH6	G	44	61	Right-handed alpha
Helix 70	AH7	G	65	78	Right-handed alpha
Helix 71	AH8	G	83	91	Right-handed alpha
Helix 72	AH9	G	121	140	Right-handed alpha
Helix 73	AI1	G	148	153	Right-handed alpha
Helix 74	AI2	G	157	176	Right-handed alpha
Helix 75	AI3	G	177	179	Right-handed 310
Helix 76	AI4	G	186	200	Right-handed alpha
Helix 77	AI5	G	204	208	Right-handed 310
Helix 78	AI6	G	210	224	Right-handed alpha
Helix 79	AI7	G	224	240	Right-handed alpha
Helix 80	AI8	G	246	260	Right-handed alpha
Helix 81	AI9	G	264	275	Right-handed alpha
Helix 82	AJ1	G	279	286	Right-handed 310
Helix 83	AJ2	G	287	305	Right-handed alpha
Helix 84	AJ3	G	306	311	Right-handed 310
Helix 85	AJ4	G	317	326	Right-handed 310
Helix 86	AJ5	G	327	342	Right-handed alpha
Helix 87	AJ6	G	356	369	Right-handed alpha
Helix 88	AJ7	G	385	400	Right-handed alpha
Helix 89	AJ8	H	4	17	Right-handed alpha
Helix 90	AJ9	H	25	29	Right-handed 310
Helix 91	AK1	H	44	61	Right-handed alpha
Helix 92	AK2	H	65	78	Right-handed alpha
Helix 93	AK3	H	83	91	Right-handed alpha
Helix 94	AK4	H	121	140	Right-handed alpha
Helix 95	AK5	H	148	153	Right-handed alpha
Helix 96	AK6	H	157	176	Right-handed alpha
Helix 97	AK7	H	177	179	Right-handed 310
Helix 98	AK8	H	186	200	Right-handed alpha
Helix 99	AK9	H	204	208	Right-handed 310
Helix 100	AL1	H	210	224	Right-handed alpha
Helix 101	AL2	H	224	240	Right-handed alpha
Helix 102	AL3	H	246	260	Right-handed alpha
Helix 103	AL4	H	264	275	Right-handed alpha
Helix 104	AL5	H	279	283	Right-handed 310
Helix 105	AL6	H	284	305	Right-handed alpha
Helix 106	AL7	H	306	311	Right-handed 310
Helix 107	AL8	H	317	326	Right-handed 310
Helix 108	AL9	H	327	342	Right-handed alpha
Helix 109	AM1	H	356	368	Right-handed alpha
Helix 110	AM2	H	385	400	Right-handed alpha
Helix 111	AM3	I	4	17	Right-handed alpha
Helix 112	AM4	I	25	29	Right-handed 310
Helix 113	AM5	I	44	61	Right-handed alpha
Helix 114	AM6	I	65	78	Right-handed alpha
Helix 115	AM7	I	83	91	Right-handed alpha
Helix 116	AM8	I	121	140	Right-handed alpha
Helix 117	AM9	I	148	153	Right-handed alpha
Helix 118	AN1	I	157	176	Right-handed alpha
Helix 119	AN2	I	177	179	Right-handed 310
Helix 120	AN3	I	186	200	Right-handed alpha
Helix 121	AN4	I	204	208	Right-handed 310
Helix 122	AN5	I	210	224	Right-handed alpha
Helix 123	AN6	I	224	240	Right-handed alpha
Helix 124	AN7	I	246	260	Right-handed alpha
Helix 125	AN8	I	264	275	Right-handed alpha
Helix 126	AN9	I	279	283	Right-handed 310
Helix 127	AO1	I	284	305	Right-handed alpha
Helix 128	AO2	I	306	311	Right-handed 310
Helix 129	AO3	I	317	322	Right-handed 310
Helix 130	AO4	I	323	326	Right-handed 310
Helix 131	AO5	I	327	342	Right-handed alpha
Helix 132	AO6	I	356	368	Right-handed alpha
Helix 133	AO7	I	385	400	Right-handed alpha
Helix 134	AO8	J	4	17	Right-handed alpha
Helix 135	AO9	J	25	29	Right-handed 310
Helix 136	AP1	J	44	61	Right-handed alpha
Helix 137	AP2	J	65	78	Right-handed alpha
Helix 138	AP3	J	83	91	Right-handed alpha
Helix 139	AP4	J	121	140	Right-handed alpha
Helix 140	AP5	J	148	153	Right-handed alpha
Helix 141	AP6	J	157	176	Right-handed alpha
Helix 142	AP7	J	177	179	Right-handed 310
Helix 143	AP8	J	186	200	Right-handed alpha
Helix 144	AP9	J	204	208	Right-handed 310
Helix 145	AQ1	J	210	224	Right-handed alpha
Helix 146	AQ2	J	224	240	Right-handed alpha
Helix 147	AQ3	J	246	260	Right-handed alpha
Helix 148	AQ4	J	264	275	Right-handed alpha
Helix 149	AQ5	J	279	286	Right-handed 310
Helix 150	AQ6	J	287	305	Right-handed alpha
Helix 151	AQ7	J	306	311	Right-handed 310
Helix 152	AQ8	J	317	326	Right-handed 310
Helix 153	AQ9	J	327	342	Right-handed alpha
Helix 154	AR1	J	356	369	Right-handed alpha
Helix 155	AR2	J	385	400	Right-handed alpha
Helix 156	AR3	K	4	17	Right-handed alpha
Helix 157	AR4	K	25	29	Right-handed 310
Helix 158	AR5	K	44	61	Right-handed alpha
Helix 159	AR6	K	65	78	Right-handed alpha
Helix 160	AR7	K	83	91	Right-handed alpha
Helix 161	AR8	K	121	140	Right-handed alpha
Helix 162	AR9	K	148	153	Right-handed alpha
Helix 163	AS1	K	157	176	Right-handed alpha
Helix 164	AS2	K	177	179	Right-handed 310
Helix 165	AS3	K	186	200	Right-handed alpha
Helix 166	AS4	K	204	208	Right-handed 310
Helix 167	AS5	K	210	224	Right-handed alpha
Helix 168	AS6	K	224	240	Right-handed alpha
Helix 169	AS7	K	246	260	Right-handed alpha
Helix 170	AS8	K	264	275	Right-handed alpha
Helix 171	AS9	K	279	286	Right-handed 310
Helix 172	AT1	K	287	305	Right-handed alpha
Helix 173	AT2	K	306	311	Right-handed 310
Helix 174	AT3	K	316	326	Right-handed 310
Helix 175	AT4	K	327	342	Right-handed alpha
Helix 176	AT5	K	356	368	Right-handed alpha
Helix 177	AT6	K	385	400	Right-handed alpha
Helix 178	AT7	L	4	17	Right-handed alpha
Helix 179	AT8	L	25	29	Right-handed 310
Helix 180	AT9	L	44	61	Right-handed alpha
Helix 181	AU1	L	65	78	Right-handed alpha
Helix 182	AU2	L	83	91	Right-handed alpha
Helix 183	AU3	L	121	140	Right-handed alpha
Helix 184	AU4	L	148	153	Right-handed alpha
Helix 185	AU5	L	157	176	Right-handed alpha
Helix 186	AU6	L	186	200	Right-handed alpha
Helix 187	AU7	L	204	208	Right-handed 310
Helix 188	AU8	L	210	224	Right-handed alpha
Helix 189	AU9	L	224	240	Right-handed alpha
Helix 190	AV1	L	246	260	Right-handed alpha
Helix 191	AV2	L	264	275	Right-handed alpha
Helix 192	AV3	L	279	286	Right-handed 310
Helix 193	AV4	L	287	305	Right-handed alpha
Helix 194	AV5	L	306	311	Right-handed 310
Helix 195	AV6	L	317	326	Right-handed 310
Helix 196	AV7	L	327	342	Right-handed alpha
Helix 197	AV8	L	356	368	Right-handed alpha
Helix 198	AV9	L	385	400	Right-handed alpha
Helix 199	AW1	M	4	17	Right-handed alpha
Helix 200	AW2	M	25	29	Right-handed 310
Helix 201	AW3	M	44	61	Right-handed alpha
Helix 202	AW4	M	65	78	Right-handed alpha
Helix 203	AW5	M	83	91	Right-handed alpha
Helix 204	AW6	M	121	140	Right-handed alpha
Helix 205	AW7	M	148	153	Right-handed alpha
Helix 206	AW8	M	157	176	Right-handed alpha
Helix 207	AW9	M	177	179	Right-handed 310
Helix 208	AX1	M	186	200	Right-handed alpha
Helix 209	AX2	M	204	208	Right-handed 310
Helix 210	AX3	M	210	224	Right-handed alpha
Helix 211	AX4	M	224	240	Right-handed alpha
Helix 212	AX5	M	246	260	Right-handed alpha
Helix 213	AX6	M	264	275	Right-handed alpha
Helix 214	AX7	M	279	283	Right-handed 310
Helix 215	AX8	M	284	305	Right-handed alpha
Helix 216	AX9	M	306	311	Right-handed 310
Helix 217	AY1	M	317	326	Right-handed 310
Helix 218	AY2	M	327	342	Right-handed alpha
Helix 219	AY3	M	356	370	Right-handed alpha
Helix 220	AY4	M	385	400	Right-handed alpha
Helix 221	AY5	N	4	17	Right-handed alpha
Helix 222	AY6	N	25	29	Right-handed 310
Helix 223	AY7	N	44	61	Right-handed alpha
Helix 224	AY8	N	65	78	Right-handed alpha
Helix 225	AY9	N	83	91	Right-handed alpha
Helix 226	AZ1	N	121	140	Right-handed alpha
Helix 227	AZ2	N	148	153	Right-handed alpha
Helix 228	AZ3	N	157	176	Right-handed alpha
Helix 229	AZ4	N	177	179	Right-handed 310
Helix 230	AZ5	N	186	200	Right-handed alpha
Helix 231	AZ6	N	204	208	Right-handed 310
Helix 232	AZ7	N	210	224	Right-handed alpha
Helix 233	AZ8	N	224	240	Right-handed alpha
Helix 234	AZ9	N	246	260	Right-handed alpha
Helix 235	BA1	N	264	275	Right-handed alpha
Helix 236	BA2	N	279	283	Right-handed 310
Helix 237	BA3	N	284	305	Right-handed alpha
Helix 238	BA4	N	306	311	Right-handed 310
Helix 239	BA5	N	317	326	Right-handed 310
Helix 240	BA6	N	327	342	Right-handed alpha
Helix 241	BA7	N	356	369	Right-handed alpha
Helix 242	BA8	N	385	400	Right-handed alpha
Helix 243	BA9	O	4	17	Right-handed alpha
Helix 244	BB1	O	25	29	Right-handed 310
Helix 245	BB2	O	44	61	Right-handed alpha
Helix 246	BB3	O	65	78	Right-handed alpha
Helix 247	BB4	O	83	91	Right-handed alpha
Helix 248	BB5	O	121	140	Right-handed alpha
Helix 249	BB6	O	148	153	Right-handed alpha
Helix 250	BB7	O	157	177	Right-handed alpha
Helix 251	BB8	O	186	200	Right-handed alpha
Helix 252	BB9	O	204	208	Right-handed 310
Helix 253	BC1	O	210	224	Right-handed alpha
Helix 254	BC2	O	224	240	Right-handed alpha
Helix 255	BC3	O	246	260	Right-handed alpha
Helix 256	BC4	O	264	273	Right-handed alpha
Helix 257	BC5	O	279	286	Right-handed 310
Helix 258	BC6	O	287	305	Right-handed alpha
Helix 259	BC7	O	306	311	Right-handed 310
Helix 260	BC8	O	317	326	Right-handed 310
Helix 261	BC9	O	327	342	Right-handed alpha
Helix 262	BD1	O	356	369	Right-handed alpha
Helix 263	BD2	O	385	400	Right-handed alpha
Helix 264	BD3	P	4	17	Right-handed alpha
Helix 265	BD4	P	25	29	Right-handed 310
Helix 266	BD5	P	44	61	Right-handed alpha
Helix 267	BD6	P	65	78	Right-handed alpha
Helix 268	BD7	P	83	91	Right-handed alpha
Helix 269	BD8	P	121	140	Right-handed alpha
Helix 270	BD9	P	147	153	Right-handed alpha
Helix 271	BE1	P	157	177	Right-handed alpha
Helix 272	BE2	P	186	200	Right-handed alpha
Helix 273	BE3	P	204	208	Right-handed 310
Helix 274	BE4	P	210	224	Right-handed alpha
Helix 275	BE5	P	224	240	Right-handed alpha
Helix 276	BE6	P	246	260	Right-handed alpha
Helix 277	BE7	P	264	273	Right-handed alpha
Helix 278	BE8	P	279	284	Right-handed 310
Helix 279	BE9	P	287	305	Right-handed alpha
Helix 280	BF1	P	306	311	Right-handed 310
Helix 281	BF2	P	317	322	Right-handed alpha
Helix 282	BF3	P	323	326	Right-handed 310
Helix 283	BF4	P	327	342	Right-handed alpha
Helix 284	BF5	P	356	368	Right-handed alpha
Helix 285	BF6	P	385	400	Right-handed alpha
Helix 286	BF7	Q	4	17	Right-handed alpha
Helix 287	BF8	Q	25	29	Right-handed 310
Helix 288	BF9	Q	44	61	Right-handed alpha
Helix 289	BG1	Q	65	78	Right-handed alpha
Helix 290	BG2	Q	83	91	Right-handed alpha
Helix 291	BG3	Q	121	140	Right-handed alpha
Helix 292	BG4	Q	147	153	Right-handed alpha
Helix 293	BG5	Q	157	176	Right-handed alpha
Helix 294	BG6	Q	177	179	Right-handed 310
Helix 295	BG7	Q	186	200	Right-handed alpha
Helix 296	BG8	Q	204	208	Right-handed 310
Helix 297	BG9	Q	210	224	Right-handed alpha
Helix 298	BH1	Q	225	240	Right-handed alpha
Helix 299	BH2	Q	246	260	Right-handed alpha
Helix 300	BH3	Q	264	275	Right-handed alpha
Helix 301	BH4	Q	279	286	Right-handed 310
Helix 302	BH5	Q	287	305	Right-handed alpha
Helix 303	BH6	Q	306	311	Right-handed 310
Helix 304	BH7	Q	316	326	Right-handed 310
Helix 305	BH8	Q	327	342	Right-handed alpha
Helix 306	BH9	Q	356	369	Right-handed alpha
Helix 307	BI1	Q	385	400	Right-handed alpha

There are 14 sheets in PDB entry 9NUF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	39	first strand
Strand 2	D	97	103	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	33	39	first strand
Strand 2	E	97	103	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	33	39	first strand
Strand 2	F	97	103	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	33	39	first strand
Strand 2	G	97	103	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	33	39	first strand
Strand 2	H	97	103	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	33	39	first strand
Strand 2	I	97	103	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	33	39	first strand
Strand 2	J	97	103	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	33	39	first strand
Strand 2	K	97	103	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	33	39	first strand
Strand 2	L	97	103	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	33	39	first strand
Strand 2	M	97	103	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	33	39	first strand
Strand 2	N	97	103	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	33	39	first strand
Strand 2	O	97	103	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	33	39	first strand
Strand 2	P	97	103	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	33	39	first strand
Strand 2	Q	97	103	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9NUF

Analysis of interatomic Contacts of Structural Units in PDB entry:
9NUF