Analysis of interatomic Contacts of Structural Units in PDB entry:
9NWD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9NWD entry

There are 2 chains in PDB entry 9NWD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 28SER 1613
B
 GLY 28SER 1613
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are144 helices in PDB entry 9NWD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 42Right-handed alpha
Helix 2
AA2
A
48 59Right-handed alpha
Helix 3
AA3
A
59 65Right-handed alpha
Helix 4
AA4
A
70 88Right-handed alpha
Helix 5
AA5
A
93 117Right-handed alpha
Helix 6
AA6
A
125 138Right-handed alpha
Helix 7
AA7
A
144 158Right-handed alpha
Helix 8
AA8
A
183 199Right-handed alpha
Helix 9
AA9
A
230 251Right-handed alpha
Helix 10
AB1
A
251 262Right-handed alpha
Helix 11
AB2
A
263 278Right-handed alpha
Helix 12
AB3
A
279 281Right-handed 310
Helix 13
AB4
A
288 298Right-handed alpha
Helix 14
AB5
A
298 315Right-handed alpha
Helix 15
AB6
A
322 354Right-handed alpha
Helix 16
AB7
A
367 395Right-handed alpha
Helix 17
AB8
A
400 424Right-handed alpha
Helix 18
AB9
A
425 433Right-handed alpha
Helix 19
AC1
A
443 451Right-handed alpha
Helix 20
AC2
A
470 494Right-handed alpha
Helix 21
AC3
A
516 528Right-handed alpha
Helix 22
AC4
A
529 554Right-handed alpha
Helix 23
AC5
A
643 662Right-handed alpha
Helix 24
AC6
A
667 678Right-handed alpha
Helix 25
AC7
A
679 695Right-handed alpha
Helix 26
AC8
A
701 720Right-handed alpha
Helix 27
AC9
A
724 736Right-handed alpha
Helix 28
AD1
A
750 771Right-handed alpha
Helix 29
AD2
A
776 797Right-handed alpha
Helix 30
AD3
A
801 805Right-handed 310
Helix 31
AD4
A
807 821Right-handed alpha
Helix 32
AD5
A
822 841Right-handed alpha
Helix 33
AD6
A
843 850Right-handed alpha
Helix 34
AD7
A
852 868Right-handed alpha
Helix 35
AD8
A
873 884Right-handed alpha
Helix 36
AD9
A
911 921Right-handed alpha
Helix 37
AE1
A
949 957Right-handed alpha
Helix 38
AE2
A
962 974Right-handed alpha
Helix 39
AE3
A
979 987Right-handed alpha
Helix 40
AE4
A
992 1013Right-handed alpha
Helix 41
AE5
A
1016 1024Right-handed alpha
Helix 42
AE6
A
1031 1047Right-handed alpha
Helix 43
AE7
A
1047 1062Right-handed alpha
Helix 44
AE8
A
1064 1077Right-handed alpha
Helix 45
AE9
A
1079 1101Right-handed alpha
Helix 46
AF1
A
1102 1104Right-handed 310
Helix 47
AF2
A
1117 1143Right-handed alpha
Helix 48
AF3
A
1152 1179Right-handed alpha
Helix 49
AF4
A
1191 1205Right-handed alpha
Helix 50
AF5
A
1213 1221Right-handed alpha
Helix 51
AF6
A
1222 1236Right-handed alpha
Helix 52
AF7
A
1245 1253Right-handed 310
Helix 53
AF8
A
1257 1275Right-handed alpha
Helix 54
AF9
A
1279 1282Right-handed 310
Helix 55
AG1
A
1283 1301Right-handed alpha
Helix 56
AG2
A
1306 1319Right-handed alpha
Helix 57
AG3
A
1326 1338Right-handed alpha
Helix 58
AG4
A
1343 1365Right-handed alpha
Helix 59
AG5
A
1367 1371Right-handed 310
Helix 60
AG6
A
1373 1390Right-handed alpha
Helix 61
AG7
A
1390 1405Right-handed alpha
Helix 62
AG8
A
1405 1415Right-handed alpha
Helix 63
AG9
A
1420 1441Right-handed alpha
Helix 64
AH1
A
1443 1454Right-handed alpha
Helix 65
AH2
A
1455 1458Right-handed 310
Helix 66
AH3
A
1460 1473Right-handed alpha
Helix 67
AH4
A
1481 1501Right-handed alpha
Helix 68
AH5
A
1506 1528Right-handed alpha
Helix 69
AH6
A
1533 1547Right-handed alpha
Helix 70
AH7
A
1553 1572Right-handed alpha
Helix 71
AH8
A
1573 1582Right-handed alpha
Helix 72
AH9
A
1590 1613Right-handed alpha
Helix 73
AI1
B
29 43Right-handed alpha
Helix 74
AI2
B
45 47Right-handed 310
Helix 75
AI3
B
48 65Right-handed alpha
Helix 76
AI4
B
67 69Right-handed 310
Helix 77
AI5
B
70 88Right-handed alpha
Helix 78
AI6
B
93 117Right-handed alpha
Helix 79
AI7
B
125 138Right-handed alpha
Helix 80
AI8
B
144 157Right-handed alpha
Helix 81
AI9
B
183 199Right-handed alpha
Helix 82
AJ1
B
230 250Right-handed alpha
Helix 83
AJ2
B
251 262Right-handed alpha
Helix 84
AJ3
B
263 277Right-handed alpha
Helix 85
AJ4
B
288 298Right-handed alpha
Helix 86
AJ5
B
298 313Right-handed alpha
Helix 87
AJ6
B
314 319Right-handed 310
Helix 88
AJ7
B
322 354Right-handed alpha
Helix 89
AJ8
B
367 395Right-handed alpha
Helix 90
AJ9
B
400 423Right-handed alpha
Helix 91
AK1
B
425 433Right-handed alpha
Helix 92
AK2
B
443 451Right-handed alpha
Helix 93
AK3
B
470 495Right-handed alpha
Helix 94
AK4
B
516 527Right-handed alpha
Helix 95
AK5
B
529 554Right-handed alpha
Helix 96
AK6
B
643 662Right-handed alpha
Helix 97
AK7
B
667 678Right-handed alpha
Helix 98
AK8
B
679 696Right-handed alpha
Helix 99
AK9
B
702 720Right-handed alpha
Helix 100
AL1
B
724 736Right-handed alpha
Helix 101
AL2
B
750 771Right-handed alpha
Helix 102
AL3
B
776 797Right-handed alpha
Helix 103
AL4
B
807 821Right-handed alpha
Helix 104
AL5
B
822 840Right-handed alpha
Helix 105
AL6
B
843 849Right-handed alpha
Helix 106
AL7
B
852 868Right-handed alpha
Helix 107
AL8
B
873 884Right-handed alpha
Helix 108
AL9
B
911 923Right-handed alpha
Helix 109
AM1
B
941 945Right-handed 310
Helix 110
AM2
B
949 958Right-handed alpha
Helix 111
AM3
B
962 973Right-handed alpha
Helix 112
AM4
B
974 976Right-handed 310
Helix 113
AM5
B
979 987Right-handed alpha
Helix 114
AM6
B
992 1013Right-handed alpha
Helix 115
AM7
B
1016 1025Right-handed alpha
Helix 116
AM8
B
1031 1047Right-handed alpha
Helix 117
AM9
B
1047 1061Right-handed alpha
Helix 118
AN1
B
1064 1076Right-handed alpha
Helix 119
AN2
B
1077 1081Right-handed 310
Helix 120
AN3
B
1082 1101Right-handed alpha
Helix 121
AN4
B
1117 1142Right-handed alpha
Helix 122
AN5
B
1152 1181Right-handed alpha
Helix 123
AN6
B
1191 1204Right-handed alpha
Helix 124
AN7
B
1213 1221Right-handed alpha
Helix 125
AN8
B
1223 1236Right-handed alpha
Helix 126
AN9
B
1256 1275Right-handed alpha
Helix 127
AO1
B
1280 1300Right-handed alpha
Helix 128
AO2
B
1306 1320Right-handed alpha
Helix 129
AO3
B
1326 1339Right-handed alpha
Helix 130
AO4
B
1343 1365Right-handed alpha
Helix 131
AO5
B
1367 1371Right-handed 310
Helix 132
AO6
B
1373 1389Right-handed alpha
Helix 133
AO7
B
1390 1402Right-handed alpha
Helix 134
AO8
B
1405 1416Right-handed alpha
Helix 135
AO9
B
1420 1441Right-handed alpha
Helix 136
AP1
B
1443 1455Right-handed alpha
Helix 137
AP2
B
1456 1458Right-handed 310
Helix 138
AP3
B
1460 1473Right-handed alpha
Helix 139
AP4
B
1481 1501Right-handed alpha
Helix 140
AP5
B
1507 1528Right-handed alpha
Helix 141
AP6
B
1533 1546Right-handed alpha
Helix 142
AP7
B
1552 1573Right-handed alpha
Helix 143
AP8
B
1573 1582Right-handed alpha
Helix 144
AP9
B
1587 1613Right-handed alpha
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There are no sheets in PDB entry 9NWD
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