Analysis of interatomic Contacts of Structural Units in PDB entry:
9O12


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9O12 entry

There are 4 chains in PDB entry 9O12 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 167GLU 427
B
 CYS 167GLU 427
C
 CYS 167GLU 427
D
 CYS 167GLU 427
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 9O12. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
169 181Right-handed alpha
Helix 2
AA2
A
185 208Right-handed alpha
Helix 3
AA3
A
209 211Right-handed 310
Helix 4
AA4
A
226 251Right-handed alpha
Helix 5
AA5
A
253 259Right-handed alpha
Helix 6
AA6
A
260 280Right-handed alpha
Helix 7
AA7
A
288 302Right-handed alpha
Helix 8
AA8
A
303 313Right-handed 310
Helix 9
AA9
A
314 354Right-handed alpha
Helix 10
AB1
A
363 376Right-handed alpha
Helix 11
AB2
A
387 407Right-handed alpha
Helix 12
AB3
A
408 425Right-handed alpha
Helix 13
AB4
B
168 181Right-handed alpha
Helix 14
AB5
B
187 209Right-handed alpha
Helix 15
AB6
B
226 250Right-handed alpha
Helix 16
AB7
B
253 260Right-handed alpha
Helix 17
AB8
B
260 280Right-handed alpha
Helix 18
AB9
B
288 300Right-handed alpha
Helix 19
AC1
B
301 309Right-handed 310
Helix 20
AC2
B
315 327Right-handed alpha
Helix 21
AC3
B
327 354Right-handed alpha
Helix 22
AC4
B
364 366Right-handed 310
Helix 23
AC5
B
367 375Right-handed alpha
Helix 24
AC6
B
387 407Right-handed alpha
Helix 25
AC7
B
408 425Right-handed alpha
Helix 26
AC8
C
168 175Right-handed alpha
Helix 27
AC9
C
175 181Right-handed alpha
Helix 28
AD1
C
185 209Right-handed alpha
Helix 29
AD2
C
226 250Right-handed alpha
Helix 30
AD3
C
253 259Right-handed alpha
Helix 31
AD4
C
260 280Right-handed alpha
Helix 32
AD5
C
281 285Right-handed 310
Helix 33
AD6
C
288 299Right-handed alpha
Helix 34
AD7
C
300 314Right-handed 310
Helix 35
AD8
C
315 354Right-handed alpha
Helix 36
AD9
C
363 375Right-handed alpha
Helix 37
AE1
C
387 407Right-handed alpha
Helix 38
AE2
C
408 425Right-handed alpha
Helix 39
AE3
D
170 181Right-handed alpha
Helix 40
AE4
D
185 209Right-handed alpha
Helix 41
AE5
D
210 213Right-handed 310
Helix 42
AE6
D
226 251Right-handed alpha
Helix 43
AE7
D
253 260Right-handed alpha
Helix 44
AE8
D
260 281Right-handed alpha
Helix 45
AE9
D
288 302Right-handed alpha
Helix 46
AF1
D
303 313Right-handed 310
Helix 47
AF2
D
314 332Right-handed alpha
Helix 48
AF3
D
333 354Right-handed alpha
Helix 49
AF4
D
363 376Right-handed alpha
Helix 50
AF5
D
387 407Right-handed alpha
Helix 51
AF6
D
408 425Right-handed alpha
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There are 2 sheets in PDB entry 9O12. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 217first strand
Strand 2
A
223 224anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
215 217first strand
Strand 2
D
223 225anti-parallel
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