Analysis of interatomic Contacts of Structural Units in PDB entry:
9O1M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9O1M entry

There are 2 chains in PDB entry 9O1M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ARG 48ASP 886
A
 ARG 48ASP 886
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 9O1M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
90 103Right-handed alpha
Helix 2
AA2
B
104 109Right-handed alpha
Helix 3
AA3
B
131 142Right-handed alpha
Helix 4
AA4
B
205 218Right-handed alpha
Helix 5
AA5
B
232 239Right-handed alpha
Helix 6
AA6
B
264 273Right-handed alpha
Helix 7
AA7
B
275 279Right-handed 310
Helix 8
AA8
B
284 293Right-handed alpha
Helix 9
AA9
B
293 327Right-handed alpha
Helix 10
AB1
B
328 330Right-handed 310
Helix 11
AB2
B
331 339Right-handed alpha
Helix 12
AB3
B
360 363Right-handed 310
Helix 13
AB4
B
364 375Right-handed alpha
Helix 14
AB5
B
376 409Right-handed alpha
Helix 15
AB6
B
420 426Right-handed alpha
Helix 16
AB7
B
448 458Right-handed alpha
Helix 17
AB8
B
458 489Right-handed alpha
Helix 18
AB9
B
506 539Right-handed alpha
Helix 19
AC1
B
543 573Right-handed alpha
Helix 20
AC2
B
601 638Right-handed alpha
Helix 21
AC3
B
648 655Right-handed alpha
Helix 22
AC4
B
664 680Right-handed alpha
Helix 23
AC5
B
687 709Right-handed alpha
Helix 24
AC6
B
724 746Right-handed alpha
Helix 25
AC7
B
749 759Right-handed alpha
Helix 26
AC8
B
775 781Right-handed alpha
Helix 27
AC9
B
787 789Right-handed 310
Helix 28
AD1
B
796 802Right-handed 310
Helix 29
AD2
B
825 857Right-handed alpha
Helix 30
AD3
B
861 886Right-handed alpha
Helix 31
AD4
A
90 103Right-handed alpha
Helix 32
AD5
A
104 109Right-handed alpha
Helix 33
AD6
A
131 142Right-handed alpha
Helix 34
AD7
A
205 218Right-handed alpha
Helix 35
AD8
A
232 239Right-handed alpha
Helix 36
AD9
A
264 273Right-handed alpha
Helix 37
AE1
A
275 279Right-handed 310
Helix 38
AE2
A
284 293Right-handed alpha
Helix 39
AE3
A
293 327Right-handed alpha
Helix 40
AE4
A
328 330Right-handed 310
Helix 41
AE5
A
331 339Right-handed alpha
Helix 42
AE6
A
360 363Right-handed 310
Helix 43
AE7
A
364 375Right-handed alpha
Helix 44
AE8
A
376 409Right-handed alpha
Helix 45
AE9
A
420 426Right-handed alpha
Helix 46
AF1
A
448 458Right-handed alpha
Helix 47
AF2
A
458 489Right-handed alpha
Helix 48
AF3
A
506 539Right-handed alpha
Helix 49
AF4
A
543 573Right-handed alpha
Helix 50
AF5
A
601 638Right-handed alpha
Helix 51
AF6
A
648 655Right-handed alpha
Helix 52
AF7
A
664 680Right-handed alpha
Helix 53
AF8
A
687 709Right-handed alpha
Helix 54
AF9
A
724 746Right-handed alpha
Helix 55
AG1
A
749 759Right-handed alpha
Helix 56
AG2
A
775 781Right-handed alpha
Helix 57
AG3
A
787 789Right-handed 310
Helix 58
AG4
A
796 802Right-handed 310
Helix 59
AG5
A
825 857Right-handed alpha
Helix 60
AG6
A
861 886Right-handed alpha
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There are 10 sheets in PDB entry 9O1M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 52first strand
Strand 2
B
111 116parallel
Strand 3
B
123 129anti-parallel
Strand 4
B
73 78anti-parallel
Strand 5
B
244 246anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 149first strand
Strand 2
B
183 186anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 224first strand
Strand 2
B
229 230anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
429 433first strand
Strand 2
B
438 442anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
782 785first strand
Strand 2
B
806 809anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 52first strand
Strand 2
A
111 116parallel
Strand 3
A
123 129anti-parallel
Strand 4
A
73 78anti-parallel
Strand 5
A
244 246anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 149first strand
Strand 2
A
183 186anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 224first strand
Strand 2
A
229 230anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 433first strand
Strand 2
A
438 442anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
782 785first strand
Strand 2
A
806 809anti-parallel
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