Analysis of interatomic Contacts of Structural Units in PDB entry:
9O1N

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9O1N entry

There are 2 chains in PDB entry 9O1N (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 58	THR 875
B	LYS 58	THR 875

There are 54 helices in PDB entry 9O1N. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	87	108	Right-handed alpha
Helix 2	AA2	A	131	143	Right-handed alpha
Helix 3	AA3	A	188	192	Right-handed 310
Helix 4	AA4	A	205	218	Right-handed alpha
Helix 5	AA5	A	232	239	Right-handed alpha
Helix 6	AA6	A	264	273	Right-handed alpha
Helix 7	AA7	A	275	279	Right-handed 310
Helix 8	AA8	A	284	293	Right-handed alpha
Helix 9	AA9	A	293	327	Right-handed alpha
Helix 10	AB1	A	331	339	Right-handed alpha
Helix 11	AB2	A	364	376	Right-handed alpha
Helix 12	AB3	A	377	408	Right-handed alpha
Helix 13	AB4	A	420	427	Right-handed alpha
Helix 14	AB5	A	450	482	Right-handed alpha
Helix 15	AB6	A	504	539	Right-handed alpha
Helix 16	AB7	A	544	573	Right-handed alpha
Helix 17	AB8	A	600	614	Right-handed alpha
Helix 18	AB9	A	614	641	Right-handed alpha
Helix 19	AC1	A	648	656	Right-handed alpha
Helix 20	AC2	A	662	681	Right-handed alpha
Helix 21	AC3	A	682	685	Right-handed 310
Helix 22	AC4	A	687	710	Right-handed alpha
Helix 23	AC5	A	724	747	Right-handed alpha
Helix 24	AC6	A	749	759	Right-handed alpha
Helix 25	AC7	A	775	781	Right-handed alpha
Helix 26	AC8	A	825	857	Right-handed alpha
Helix 27	AC9	A	861	875	Right-handed alpha
Helix 28	AD1	B	87	108	Right-handed alpha
Helix 29	AD2	B	131	143	Right-handed alpha
Helix 30	AD3	B	188	192	Right-handed 310
Helix 31	AD4	B	205	218	Right-handed alpha
Helix 32	AD5	B	232	239	Right-handed alpha
Helix 33	AD6	B	264	273	Right-handed alpha
Helix 34	AD7	B	275	279	Right-handed 310
Helix 35	AD8	B	284	293	Right-handed alpha
Helix 36	AD9	B	293	327	Right-handed alpha
Helix 37	AE1	B	331	339	Right-handed alpha
Helix 38	AE2	B	364	376	Right-handed alpha
Helix 39	AE3	B	377	408	Right-handed alpha
Helix 40	AE4	B	420	427	Right-handed alpha
Helix 41	AE5	B	450	482	Right-handed alpha
Helix 42	AE6	B	504	539	Right-handed alpha
Helix 43	AE7	B	544	573	Right-handed alpha
Helix 44	AE8	B	600	614	Right-handed alpha
Helix 45	AE9	B	614	641	Right-handed alpha
Helix 46	AF1	B	648	656	Right-handed alpha
Helix 47	AF2	B	662	681	Right-handed alpha
Helix 48	AF3	B	682	685	Right-handed 310
Helix 49	AF4	B	687	710	Right-handed alpha
Helix 50	AF5	B	724	747	Right-handed alpha
Helix 51	AF6	B	749	759	Right-handed alpha
Helix 52	AF7	B	775	781	Right-handed alpha
Helix 53	AF8	B	825	857	Right-handed alpha
Helix 54	AF9	B	861	875	Right-handed alpha

There are 14 sheets in PDB entry 9O1N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	111	115	first strand
Strand 2	A	123	129	anti-parallel
Strand 3	A	73	78	anti-parallel
Strand 4	A	242	246	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	147	first strand
Strand 2	A	184	186	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	225	first strand
Strand 2	A	228	230	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	348	first strand
Strand 2	A	359	360	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	430	432	first strand
Strand 2	A	439	441	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	657	658	first strand
Strand 2	A	711	712	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	782	784	first strand
Strand 2	A	807	809	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	115	first strand
Strand 2	B	123	129	anti-parallel
Strand 3	B	73	78	anti-parallel
Strand 4	B	242	246	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	145	147	first strand
Strand 2	B	184	186	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	223	225	first strand
Strand 2	B	228	230	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	347	348	first strand
Strand 2	B	359	360	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	430	432	first strand
Strand 2	B	439	441	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	657	658	first strand
Strand 2	B	711	712	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	782	784	first strand
Strand 2	B	807	809	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9O1N

Analysis of interatomic Contacts of Structural Units in PDB entry:
9O1N