Analysis of interatomic Contacts of Structural Units in PDB entry:
9O35


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9O35 entry

There are 2 chains in PDB entry 9O35 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 6ARG 422
B
 ALA 5ARG 422
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 9O35. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 34Right-handed alpha
Helix 2
AA2
A
52 62Right-handed alpha
Helix 3
AA3
A
68 72Right-handed 310
Helix 4
AA4
A
73 77Right-handed 310
Helix 5
AA5
A
90 98Right-handed 310
Helix 6
AA6
A
99 111Right-handed alpha
Helix 7
AA7
A
112 114Right-handed 310
Helix 8
AA8
A
115 121Right-handed alpha
Helix 9
AA9
A
122 145Right-handed alpha
Helix 10
AB1
A
150 154Right-handed alpha
Helix 11
AB2
A
156 168Right-handed alpha
Helix 12
AB3
A
173 189Right-handed alpha
Helix 13
AB4
A
209 226Right-handed alpha
Helix 14
AB5
A
230 244Right-handed alpha
Helix 15
AB6
A
247 279Right-handed alpha
Helix 16
AB7
A
287 302Right-handed alpha
Helix 17
AB8
A
333 339Right-handed alpha
Helix 18
AB9
A
364 368Right-handed 310
Helix 19
AC1
A
371 390Right-handed alpha
Helix 20
AC2
A
398 401Right-handed 310
Helix 21
AC3
B
25 34Right-handed alpha
Helix 22
AC4
B
52 61Right-handed alpha
Helix 23
AC5
B
73 77Right-handed 310
Helix 24
AC6
B
90 98Right-handed 310
Helix 25
AC7
B
99 111Right-handed alpha
Helix 26
AC8
B
112 114Right-handed 310
Helix 27
AC9
B
115 121Right-handed alpha
Helix 28
AD1
B
122 145Right-handed alpha
Helix 29
AD2
B
150 154Right-handed alpha
Helix 30
AD3
B
156 167Right-handed alpha
Helix 31
AD4
B
173 189Right-handed alpha
Helix 32
AD5
B
210 226Right-handed alpha
Helix 33
AD6
B
230 244Right-handed alpha
Helix 34
AD7
B
247 262Right-handed alpha
Helix 35
AD8
B
263 279Right-handed alpha
Helix 36
AD9
B
287 302Right-handed alpha
Helix 37
AE1
B
333 339Right-handed alpha
Helix 38
AE2
B
364 368Right-handed 310
Helix 39
AE3
B
371 390Right-handed alpha
Helix 40
AE4
B
398 401Right-handed 310
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There are 8 sheets in PDB entry 9O35. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 19first strand
Strand 2
A
403 405anti-parallel
Strand 3
A
413 414anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 40first strand
Strand 2
A
46 50anti-parallel
Strand 3
A
329 332parallel
Strand 4
A
311 313anti-parallel
Strand 5
A
65 66anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 149first strand
Strand 2
A
418 420anti-parallel
Strand 3
A
394 395anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 319first strand
Strand 2
A
322 324anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 19first strand
Strand 2
B
403 405anti-parallel
Strand 3
B
413 414anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 40first strand
Strand 2
B
46 50anti-parallel
Strand 3
B
329 332parallel
Strand 4
B
311 313anti-parallel
Strand 5
B
65 66anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 149first strand
Strand 2
B
418 420anti-parallel
Strand 3
B
394 395anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
317 319first strand
Strand 2
B
322 324anti-parallel
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