Analysis of interatomic Contacts of Structural Units in PDB entry:
9O48


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9O48 entry

There are 8 chains in PDB entry 9O48 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 118GLN 490
B
 LEU 118GLN 490
C
 LEU 118GLN 490
D
 LEU 118GLN 490
E
 GLN 4THR 147
F
 GLN 4THR 147
G
 GLN 4THR 147
H
 GLN 4THR 147
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 92 helices in PDB entry 9O48. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
118 159Right-handed alpha
Helix 2
AA2
A
164 201Right-handed alpha
Helix 3
AA3
A
204 209Right-handed 310
Helix 4
AA4
A
210 225Right-handed alpha
Helix 5
AA5
A
255 260Right-handed alpha
Helix 6
AA6
A
261 265Right-handed 310
Helix 7
AA7
A
266 276Right-handed alpha
Helix 8
AA8
A
282 292Right-handed alpha
Helix 9
AA9
A
297 309Right-handed alpha
Helix 10
AB1
A
309 333Right-handed alpha
Helix 11
AB2
A
344 357Right-handed alpha
Helix 12
AB3
A
368 397Right-handed alpha
Helix 13
AB4
A
400 439Right-handed alpha
Helix 14
AB5
A
442 477Right-handed alpha
Helix 15
AB6
A
478 490Right-handed alpha
Helix 16
AB7
B
119 159Right-handed alpha
Helix 17
AB8
B
164 201Right-handed alpha
Helix 18
AB9
B
204 209Right-handed 310
Helix 19
AC1
B
210 225Right-handed alpha
Helix 20
AC2
B
255 260Right-handed alpha
Helix 21
AC3
B
261 265Right-handed 310
Helix 22
AC4
B
266 276Right-handed alpha
Helix 23
AC5
B
282 292Right-handed alpha
Helix 24
AC6
B
297 309Right-handed alpha
Helix 25
AC7
B
309 333Right-handed alpha
Helix 26
AC8
B
344 357Right-handed alpha
Helix 27
AC9
B
368 397Right-handed alpha
Helix 28
AD1
B
400 439Right-handed alpha
Helix 29
AD2
B
442 477Right-handed alpha
Helix 30
AD3
B
478 490Right-handed alpha
Helix 31
AD4
C
119 159Right-handed alpha
Helix 32
AD5
C
164 201Right-handed alpha
Helix 33
AD6
C
204 209Right-handed 310
Helix 34
AD7
C
210 225Right-handed alpha
Helix 35
AD8
C
255 260Right-handed alpha
Helix 36
AD9
C
261 265Right-handed 310
Helix 37
AE1
C
266 276Right-handed alpha
Helix 38
AE2
C
282 292Right-handed alpha
Helix 39
AE3
C
297 309Right-handed alpha
Helix 40
AE4
C
309 333Right-handed alpha
Helix 41
AE5
C
344 357Right-handed alpha
Helix 42
AE6
C
368 397Right-handed alpha
Helix 43
AE7
C
400 439Right-handed alpha
Helix 44
AE8
C
442 477Right-handed alpha
Helix 45
AE9
C
478 490Right-handed alpha
Helix 46
AF1
D
119 159Right-handed alpha
Helix 47
AF2
D
164 201Right-handed alpha
Helix 48
AF3
D
204 209Right-handed 310
Helix 49
AF4
D
210 225Right-handed alpha
Helix 50
AF5
D
255 260Right-handed alpha
Helix 51
AF6
D
261 265Right-handed 310
Helix 52
AF7
D
266 276Right-handed alpha
Helix 53
AF8
D
282 292Right-handed alpha
Helix 54
AF9
D
297 309Right-handed alpha
Helix 55
AG1
D
309 333Right-handed alpha
Helix 56
AG2
D
344 357Right-handed alpha
Helix 57
AG3
D
368 397Right-handed alpha
Helix 58
AG4
D
400 439Right-handed alpha
Helix 59
AG5
D
442 477Right-handed alpha
Helix 60
AG6
D
478 490Right-handed alpha
Helix 61
AG7
E
6 21Right-handed alpha
Helix 62
AG8
E
29 40Right-handed alpha
Helix 63
AG9
E
45 54Right-handed alpha
Helix 64
AH1
E
65 77Right-handed alpha
Helix 65
AH2
E
81 94Right-handed alpha
Helix 66
AH3
E
102 109Right-handed alpha
Helix 67
AH4
E
120 130Right-handed alpha
Helix 68
AH5
E
138 147Right-handed alpha
Helix 69
AH6
F
6 21Right-handed alpha
Helix 70
AH7
F
29 40Right-handed alpha
Helix 71
AH8
F
45 54Right-handed alpha
Helix 72
AH9
F
65 77Right-handed alpha
Helix 73
AI1
F
81 94Right-handed alpha
Helix 74
AI2
F
102 109Right-handed alpha
Helix 75
AI3
F
120 130Right-handed alpha
Helix 76
AI4
F
138 147Right-handed alpha
Helix 77
AI5
G
6 21Right-handed alpha
Helix 78
AI6
G
29 40Right-handed alpha
Helix 79
AI7
G
45 54Right-handed alpha
Helix 80
AI8
G
65 77Right-handed alpha
Helix 81
AI9
G
81 94Right-handed alpha
Helix 82
AJ1
G
102 109Right-handed alpha
Helix 83
AJ2
G
120 130Right-handed alpha
Helix 84
AJ3
G
138 147Right-handed alpha
Helix 85
AJ4
H
6 21Right-handed alpha
Helix 86
AJ5
H
29 40Right-handed alpha
Helix 87
AJ6
H
45 54Right-handed alpha
Helix 88
AJ7
H
65 77Right-handed alpha
Helix 89
AJ8
H
81 94Right-handed alpha
Helix 90
AJ9
H
102 109Right-handed alpha
Helix 91
AK1
H
120 130Right-handed alpha
Helix 92
AK2
H
138 147Right-handed alpha
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There are 4 sheets in PDB entry 9O48. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 240first strand
Strand 2
A
247 253anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
234 240first strand
Strand 2
B
247 253anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
234 240first strand
Strand 2
C
247 253anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
234 240first strand
Strand 2
D
247 253anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il