Analysis of interatomic Contacts of Structural Units in PDB entry:
9O5H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9O5H entry

There are 2 chains in PDB entry 9O5H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1ARG 389
B
 ALA 1LYS 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9O5H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 28Right-handed alpha
Helix 2
AA2
A
31 40Right-handed alpha
Helix 3
AA3
A
58 64Right-handed 310
Helix 4
AA4
A
65 75Right-handed alpha
Helix 5
AA5
A
87 89Right-handed 310
Helix 6
AA6
A
108 126Right-handed alpha
Helix 7
AA7
A
149 160Right-handed alpha
Helix 8
AA8
A
161 164Right-handed 310
Helix 9
AA9
A
177 180Right-handed 310
Helix 10
AB1
A
181 186Right-handed alpha
Helix 11
AB2
A
187 194Right-handed alpha
Helix 12
AB3
A
205 209Right-handed 310
Helix 13
AB4
A
211 218Right-handed alpha
Helix 14
AB5
A
244 257Right-handed alpha
Helix 15
AB6
A
282 293Right-handed alpha
Helix 16
AB7
B
23 28Right-handed alpha
Helix 17
AB8
B
31 40Right-handed alpha
Helix 18
AB9
B
58 64Right-handed 310
Helix 19
AC1
B
65 75Right-handed alpha
Helix 20
AC2
B
87 89Right-handed 310
Helix 21
AC3
B
108 126Right-handed alpha
Helix 22
AC4
B
149 160Right-handed alpha
Helix 23
AC5
B
161 164Right-handed 310
Helix 24
AC6
B
177 180Right-handed 310
Helix 25
AC7
B
181 186Right-handed alpha
Helix 26
AC8
B
187 194Right-handed alpha
Helix 27
AC9
B
205 209Right-handed 310
Helix 28
AD1
B
211 218Right-handed alpha
Helix 29
AD2
B
244 257Right-handed alpha
Helix 30
AD3
B
282 293Right-handed alpha
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There are 8 sheets in PDB entry 9O5H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 362first strand
Strand 2
A
348 355anti-parallel
Strand 3
A
366 367anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 362first strand
Strand 2
A
348 355anti-parallel
Strand 3
A
381 388anti-parallel
Strand 4
A
322 329anti-parallel
Strand 5
A
312 319anti-parallel
Strand 6
A
300 304anti-parallel
Strand 7
A
4 14anti-parallel
Strand 8
A
335 342parallel
Strand 9
A
372 377anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 21first strand
Strand 2
A
50 55parallel
Strand 3
A
78 83parallel
Strand 4
A
132 134parallel
Strand 5
A
167 173parallel
Strand 6
A
196 200parallel
Strand 7
A
222 227parallel
Strand 8
A
262 267parallel
Strand 9
A
17 21parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
100 104anti-parallel
Strand 3
A
146 147parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
358 362first strand
Strand 2
B
348 355anti-parallel
Strand 3
B
366 367anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
358 362first strand
Strand 2
B
348 355anti-parallel
Strand 3
B
381 388anti-parallel
Strand 4
B
322 329anti-parallel
Strand 5
B
312 319anti-parallel
Strand 6
B
300 304anti-parallel
Strand 7
B
4 14anti-parallel
Strand 8
B
335 342parallel
Strand 9
B
372 377anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 21first strand
Strand 2
B
50 55parallel
Strand 3
B
78 83parallel
Strand 4
B
132 134parallel
Strand 5
B
167 173parallel
Strand 6
B
196 200parallel
Strand 7
B
222 227parallel
Strand 8
B
262 267parallel
Strand 9
B
17 21parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 95first strand
Strand 2
B
100 104anti-parallel
Strand 3
B
146 147parallel
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