Analysis of interatomic Contacts of Structural Units in PDB entry:
9O5U

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9O5U entry

There are 4 chains in PDB entry 9O5U (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 73	ALA 458
B	PRO 73	ALA 458
C	PRO 73	ALA 458
D	PRO 73	ALA 458

There are no helices in PDB entry 9O5U

There are 24 sheets in PDB entry 9O5U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	93	first strand
Strand 2	A	432	442	anti-parallel
Strand 3	A	417	428	anti-parallel
Strand 4	A	406	412	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	117	first strand
Strand 2	A	122	132	anti-parallel
Strand 3	A	150	155	anti-parallel
Strand 4	A	166	170	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	173	178	first strand
Strand 2	A	183	191	anti-parallel
Strand 3	A	194	201	anti-parallel
Strand 4	A	204	210	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	217	219	first strand
Strand 2	A	230	238	anti-parallel
Strand 3	A	225	227	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	217	219	first strand
Strand 2	A	230	238	anti-parallel
Strand 3	A	246	254	anti-parallel
Strand 4	A	257	266	anti-parallel
Strand 5	A	308	313	parallel
Strand 6	A	298	303	anti-parallel
Strand 7	A	283	289	anti-parallel
Strand 8	A	272	280	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	351	first strand
Strand 2	A	358	363	anti-parallel
Strand 3	A	371	379	anti-parallel
Strand 4	A	392	402	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	86	93	first strand
Strand 2	B	432	442	anti-parallel
Strand 3	B	417	428	anti-parallel
Strand 4	B	406	412	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	117	first strand
Strand 2	B	122	132	anti-parallel
Strand 3	B	150	155	anti-parallel
Strand 4	B	166	170	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	173	178	first strand
Strand 2	B	183	191	anti-parallel
Strand 3	B	194	201	anti-parallel
Strand 4	B	204	210	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	217	219	first strand
Strand 2	B	230	238	anti-parallel
Strand 3	B	225	227	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	217	219	first strand
Strand 2	B	230	238	anti-parallel
Strand 3	B	246	254	anti-parallel
Strand 4	B	257	266	anti-parallel
Strand 5	B	308	313	parallel
Strand 6	B	298	303	anti-parallel
Strand 7	B	283	289	anti-parallel
Strand 8	B	272	280	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	348	351	first strand
Strand 2	B	358	363	anti-parallel
Strand 3	B	371	379	anti-parallel
Strand 4	B	392	402	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	86	93	first strand
Strand 2	C	432	442	anti-parallel
Strand 3	C	417	428	anti-parallel
Strand 4	C	406	412	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	117	first strand
Strand 2	C	122	132	anti-parallel
Strand 3	C	150	155	anti-parallel
Strand 4	C	166	170	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	173	178	first strand
Strand 2	C	183	191	anti-parallel
Strand 3	C	194	201	anti-parallel
Strand 4	C	204	210	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	217	219	first strand
Strand 2	C	230	238	anti-parallel
Strand 3	C	225	227	anti-parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	217	219	first strand
Strand 2	C	230	238	anti-parallel
Strand 3	C	246	254	anti-parallel
Strand 4	C	257	266	anti-parallel
Strand 5	C	308	313	parallel
Strand 6	C	298	303	anti-parallel
Strand 7	C	283	289	anti-parallel
Strand 8	C	272	280	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	348	351	first strand
Strand 2	C	358	363	anti-parallel
Strand 3	C	371	379	anti-parallel
Strand 4	C	392	402	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	86	93	first strand
Strand 2	D	432	442	anti-parallel
Strand 3	D	417	428	anti-parallel
Strand 4	D	406	412	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	108	117	first strand
Strand 2	D	122	132	anti-parallel
Strand 3	D	150	155	anti-parallel
Strand 4	D	166	170	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	173	178	first strand
Strand 2	D	183	191	anti-parallel
Strand 3	D	194	201	anti-parallel
Strand 4	D	204	210	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	217	219	first strand
Strand 2	D	230	238	anti-parallel
Strand 3	D	225	227	anti-parallel

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There are 8 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	217	219	first strand
Strand 2	D	230	238	anti-parallel
Strand 3	D	246	254	anti-parallel
Strand 4	D	257	266	anti-parallel
Strand 5	D	308	313	parallel
Strand 6	D	298	303	anti-parallel
Strand 7	D	283	289	anti-parallel
Strand 8	D	272	280	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	348	351	first strand
Strand 2	D	358	363	anti-parallel
Strand 3	D	371	379	anti-parallel
Strand 4	D	392	402	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9O5U

Analysis of interatomic Contacts of Structural Units in PDB entry:
9O5U