Analysis of interatomic Contacts of Structural Units in PDB entry:
9O65


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9O65 entry

There are 3 chains in PDB entry 9O65 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 63HIS 531
B
 MET 1LYS 169
C
 LYS 6ALA 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 9O65. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
87 101Right-handed alpha
Helix 2
AA2
A
116 122Right-handed 310
Helix 3
AA3
A
139 145Right-handed 310
Helix 4
AA4
A
162 168Right-handed 310
Helix 5
AA5
A
185 191Right-handed 310
Helix 6
AA6
A
208 214Right-handed 310
Helix 7
AA7
A
231 237Right-handed 310
Helix 8
AA8
A
254 260Right-handed 310
Helix 9
AA9
A
279 283Right-handed 310
Helix 10
AB1
A
300 306Right-handed 310
Helix 11
AB2
A
325 330Right-handed alpha
Helix 12
AB3
A
350 355Right-handed 310
Helix 13
AB4
A
395 401Right-handed 310
Helix 14
AB5
A
418 424Right-handed 310
Helix 15
AB6
A
441 447Right-handed 310
Helix 16
AB7
A
464 470Right-handed 310
Helix 17
AB8
A
487 493Right-handed 310
Helix 18
AB9
A
510 516Right-handed 310
Helix 19
AC1
B
15 26Right-handed alpha
Helix 20
AC2
B
61 65Right-handed 310
Helix 21
AC3
B
67 75Right-handed alpha
Helix 22
AC4
B
86 92Right-handed alpha
Helix 23
AC5
B
92 105Right-handed alpha
Helix 24
AC6
B
126 138Right-handed alpha
Helix 25
AC7
B
151 167Right-handed alpha
Helix 26
AC8
C
8 19Right-handed alpha
Helix 27
AC9
C
20 22Right-handed 310
Helix 28
AD1
C
31 48Right-handed alpha
Helix 29
AD2
C
68 80Right-handed alpha
Helix 30
AD3
C
99 114Right-handed alpha
Helix 31
AD4
C
127 135Right-handed alpha
Helix 32
AD5
C
135 144Right-handed alpha
Helix 33
AD6
C
145 157Right-handed alpha
Helix 34
AD7
C
182 188Right-handed alpha
Helix 35
AD8
C
199 207Right-handed alpha
Helix 36
AD9
C
228 240Right-handed alpha
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There are 6 sheets in PDB entry 9O65. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 66first strand
Strand 2
C
290 296parallel
Strand 3
C
280 285anti-parallel
Strand 4
C
59 62anti-parallel
Strand 5
C
87 89parallel
Strand 6
C
118 120parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 106first strand
Strand 2
A
127 129parallel
Strand 3
A
150 152parallel
Strand 4
A
173 175parallel
Strand 5
A
196 198parallel
Strand 6
A
219 221parallel
Strand 7
A
242 244parallel
Strand 8
A
265 267parallel
Strand 9
A
288 290parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 313first strand
Strand 2
A
335 337parallel
Strand 3
A
359 361parallel
Strand 4
A
383 385parallel
Strand 5
A
406 408parallel
Strand 6
A
429 431parallel
Strand 7
A
452 454parallel
Strand 8
A
475 477parallel
Strand 9
A
498 500parallel
Strand 10
A
521 523parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 46first strand
Strand 2
B
49 57anti-parallel
Strand 3
B
2 10parallel
Strand 4
B
77 83parallel
Strand 5
B
111 116parallel
Strand 6
B
141 143parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
52 55first strand
Strand 2
C
162 165parallel
Strand 3
C
169 171anti-parallel
Strand 4
C
243 246parallel
Strand 5
C
263 266parallel
Strand 6
C
255 258anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
208 209first strand
Strand 2
C
226 227parallel
Strand 3
C
216 217anti-parallel
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