Analysis of interatomic Contacts of Structural Units in PDB entry:
9O6O

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9O6O entry

There are 3 chains in PDB entry 9O6O (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	PRO 17	ALA 235
A	ASP 18	ALA 235
D	PRO 17	ALA 235

There are 13 helices in PDB entry 9O6O. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	83	87	Right-handed 310
Helix 2	AA2	B	95	99	Right-handed 310
Helix 3	AA3	B	109	113	Right-handed 310
Helix 4	AA4	B	205	209	Right-handed 310
Helix 5	AA5	A	83	87	Right-handed 310
Helix 6	AA6	A	95	99	Right-handed 310
Helix 7	AA7	A	109	113	Right-handed 310
Helix 8	AA8	A	205	209	Right-handed 310
Helix 9	AA9	D	83	87	Right-handed 310
Helix 10	AB1	D	95	99	Right-handed 310
Helix 11	AB2	D	109	113	Right-handed 310
Helix 12	AB3	D	187	191	Right-handed 310
Helix 13	AB4	D	205	209	Right-handed 310

There are 17 sheets in PDB entry 9O6O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	22	24	first strand
Strand 2	B	42	44	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	32	first strand
Strand 2	B	135	140	parallel
Strand 3	B	114	122	anti-parallel
Strand 4	B	57	62	anti-parallel
Strand 5	B	74	75	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	32	first strand
Strand 2	B	135	140	parallel
Strand 3	B	114	122	anti-parallel
Strand 4	B	126	129	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	37	39	first strand
Strand 2	B	103	105	anti-parallel
Strand 3	B	90	92	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	147	149	first strand
Strand 2	B	160	165	anti-parallel
Strand 3	B	197	202	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	193	194	first strand
Strand 2	B	177	182	anti-parallel
Strand 3	B	212	218	anti-parallel
Strand 4	B	225	231	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	22	25	first strand
Strand 2	A	41	44	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	32	first strand
Strand 2	A	127	140	parallel
Strand 3	A	115	121	anti-parallel
Strand 4	A	57	62	anti-parallel
Strand 5	A	74	75	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	39	first strand
Strand 2	A	103	105	anti-parallel
Strand 3	A	90	92	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	149	first strand
Strand 2	A	160	165	anti-parallel
Strand 3	A	197	202	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	193	194	first strand
Strand 2	A	177	182	anti-parallel
Strand 3	A	212	218	anti-parallel
Strand 4	A	225	231	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	22	25	first strand
Strand 2	D	41	44	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	32	first strand
Strand 2	D	135	140	parallel
Strand 3	D	115	122	anti-parallel
Strand 4	D	57	62	anti-parallel
Strand 5	D	74	75	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	32	first strand
Strand 2	D	135	140	parallel
Strand 3	D	115	122	anti-parallel
Strand 4	D	126	129	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	37	39	first strand
Strand 2	D	103	105	anti-parallel
Strand 3	D	90	92	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	147	149	first strand
Strand 2	D	160	165	anti-parallel
Strand 3	D	197	202	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	193	194	first strand
Strand 2	D	177	182	anti-parallel
Strand 3	D	212	218	anti-parallel
Strand 4	D	225	231	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9O6O

Analysis of interatomic Contacts of Structural Units in PDB entry:
9O6O