Analysis of interatomic Contacts of Structural Units in PDB entry:
9O83

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9O83 entry

There are 4 chains in PDB entry 9O83 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 30	LEU 1232
C	SER 30	LEU 1232
B	SER 30	LEU 1232
D	SER 30	LEU 1232

There are182 helices in PDB entry 9O83. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	36	Right-handed alpha
Helix 2	AA2	A	130	140	Right-handed alpha
Helix 3	AA3	A	163	182	Right-handed alpha
Helix 4	AA4	A	193	206	Right-handed alpha
Helix 5	AA5	A	273	287	Right-handed alpha
Helix 6	AA6	A	307	319	Right-handed alpha
Helix 7	AA7	A	333	345	Right-handed alpha
Helix 8	AA8	A	354	368	Right-handed alpha
Helix 9	AA9	A	371	388	Right-handed alpha
Helix 10	AB1	A	404	417	Right-handed alpha
Helix 11	AB2	A	420	430	Right-handed alpha
Helix 12	AB3	A	433	441	Right-handed alpha
Helix 13	AB4	A	451	463	Right-handed alpha
Helix 14	AB5	A	465	475	Right-handed alpha
Helix 15	AB6	A	478	483	Right-handed alpha
Helix 16	AB7	A	484	494	Right-handed alpha
Helix 17	AB8	A	501	513	Right-handed alpha
Helix 18	AB9	A	533	546	Right-handed alpha
Helix 19	AC1	A	555	565	Right-handed alpha
Helix 20	AC2	A	613	625	Right-handed alpha
Helix 21	AC3	A	627	637	Right-handed alpha
Helix 22	AC4	A	640	662	Right-handed alpha
Helix 23	AC5	A	665	694	Right-handed alpha
Helix 24	AC6	A	694	704	Right-handed alpha
Helix 25	AC7	A	713	721	Right-handed alpha
Helix 26	AC8	A	723	728	Right-handed alpha
Helix 27	AC9	A	729	741	Right-handed alpha
Helix 28	AD1	A	749	759	Right-handed alpha
Helix 29	AD2	A	763	767	Right-handed 310
Helix 30	AD3	A	836	845	Right-handed alpha
Helix 31	AD4	A	847	872	Right-handed alpha
Helix 32	AD5	A	879	902	Right-handed alpha
Helix 33	AD6	A	907	917	Right-handed alpha
Helix 34	AD7	A	918	939	Right-handed alpha
Helix 35	AD8	A	943	962	Right-handed alpha
Helix 36	AD9	A	962	968	Right-handed alpha
Helix 37	AE1	A	972	1009	Right-handed alpha
Helix 38	AE2	A	1018	1025	Right-handed alpha
Helix 39	AE3	A	1028	1033	Right-handed 310
Helix 40	AE4	A	1066	1081	Right-handed alpha
Helix 41	AE5	A	1081	1120	Right-handed alpha
Helix 42	AE6	A	1124	1141	Right-handed alpha
Helix 43	AE7	A	1163	1192	Right-handed alpha
Helix 44	AE8	A	1192	1232	Right-handed alpha
Helix 45	AE9	C	31	36	Right-handed alpha
Helix 46	AF1	C	59	63	Right-handed 310
Helix 47	AF2	C	130	140	Right-handed alpha
Helix 48	AF3	C	163	182	Right-handed alpha
Helix 49	AF4	C	193	206	Right-handed alpha
Helix 50	AF5	C	227	231	Right-handed 310
Helix 51	AF6	C	273	287	Right-handed alpha
Helix 52	AF7	C	308	319	Right-handed alpha
Helix 53	AF8	C	334	345	Right-handed alpha
Helix 54	AF9	C	353	368	Right-handed alpha
Helix 55	AG1	C	371	387	Right-handed alpha
Helix 56	AG2	C	404	415	Right-handed alpha
Helix 57	AG3	C	420	432	Right-handed alpha
Helix 58	AG4	C	433	440	Right-handed alpha
Helix 59	AG5	C	451	463	Right-handed alpha
Helix 60	AG6	C	465	476	Right-handed alpha
Helix 61	AG7	C	478	483	Right-handed alpha
Helix 62	AG8	C	484	493	Right-handed alpha
Helix 63	AG9	C	501	513	Right-handed alpha
Helix 64	AH1	C	533	546	Right-handed alpha
Helix 65	AH2	C	555	563	Right-handed alpha
Helix 66	AH3	C	613	625	Right-handed alpha
Helix 67	AH4	C	627	637	Right-handed alpha
Helix 68	AH5	C	640	662	Right-handed alpha
Helix 69	AH6	C	665	694	Right-handed alpha
Helix 70	AH7	C	694	702	Right-handed alpha
Helix 71	AH8	C	713	722	Right-handed alpha
Helix 72	AH9	C	729	742	Right-handed alpha
Helix 73	AI1	C	749	759	Right-handed alpha
Helix 74	AI2	C	763	767	Right-handed 310
Helix 75	AI3	C	835	845	Right-handed alpha
Helix 76	AI4	C	847	872	Right-handed alpha
Helix 77	AI5	C	879	902	Right-handed alpha
Helix 78	AI6	C	907	917	Right-handed alpha
Helix 79	AI7	C	918	939	Right-handed alpha
Helix 80	AI8	C	943	967	Right-handed alpha
Helix 81	AI9	C	973	1010	Right-handed alpha
Helix 82	AJ1	C	1017	1026	Right-handed alpha
Helix 83	AJ2	C	1027	1031	Right-handed 310
Helix 84	AJ3	C	1066	1081	Right-handed alpha
Helix 85	AJ4	C	1082	1102	Right-handed alpha
Helix 86	AJ5	C	1102	1120	Right-handed alpha
Helix 87	AJ6	C	1124	1127	Right-handed 310
Helix 88	AJ7	C	1128	1138	Right-handed alpha
Helix 89	AJ8	C	1139	1141	Right-handed 310
Helix 90	AJ9	C	1163	1192	Right-handed alpha
Helix 91	AK1	C	1192	1232	Right-handed alpha
Helix 92	AK2	B	31	36	Right-handed alpha
Helix 93	AK3	B	130	140	Right-handed alpha
Helix 94	AK4	B	163	182	Right-handed alpha
Helix 95	AK5	B	193	205	Right-handed alpha
Helix 96	AK6	B	273	287	Right-handed alpha
Helix 97	AK7	B	308	319	Right-handed alpha
Helix 98	AK8	B	333	345	Right-handed alpha
Helix 99	AK9	B	354	367	Right-handed alpha
Helix 100	AL1	B	371	388	Right-handed alpha
Helix 101	AL2	B	404	416	Right-handed alpha
Helix 102	AL3	B	420	432	Right-handed alpha
Helix 103	AL4	B	433	440	Right-handed alpha
Helix 104	AL5	B	451	463	Right-handed alpha
Helix 105	AL6	B	465	475	Right-handed alpha
Helix 106	AL7	B	478	483	Right-handed alpha
Helix 107	AL8	B	484	494	Right-handed alpha
Helix 108	AL9	B	501	514	Right-handed alpha
Helix 109	AM1	B	533	546	Right-handed alpha
Helix 110	AM2	B	551	554	Right-handed 310
Helix 111	AM3	B	555	566	Right-handed alpha
Helix 112	AM4	B	613	625	Right-handed alpha
Helix 113	AM5	B	627	637	Right-handed alpha
Helix 114	AM6	B	640	663	Right-handed alpha
Helix 115	AM7	B	665	692	Right-handed alpha
Helix 116	AM8	B	694	703	Right-handed alpha
Helix 117	AM9	B	706	710	Right-handed 310
Helix 118	AN1	B	713	721	Right-handed alpha
Helix 119	AN2	B	723	728	Right-handed alpha
Helix 120	AN3	B	729	741	Right-handed alpha
Helix 121	AN4	B	749	759	Right-handed alpha
Helix 122	AN5	B	760	765	Right-handed 310
Helix 123	AN6	B	835	845	Right-handed alpha
Helix 124	AN7	B	847	872	Right-handed alpha
Helix 125	AN8	B	879	902	Right-handed alpha
Helix 126	AN9	B	907	918	Right-handed alpha
Helix 127	AO1	B	918	939	Right-handed alpha
Helix 128	AO2	B	943	967	Right-handed alpha
Helix 129	AO3	B	973	1009	Right-handed alpha
Helix 130	AO4	B	1017	1029	Right-handed alpha
Helix 131	AO5	B	1036	1040	Right-handed 310
Helix 132	AO6	B	1066	1120	Right-handed alpha
Helix 133	AO7	B	1124	1138	Right-handed alpha
Helix 134	AO8	B	1163	1192	Right-handed alpha
Helix 135	AO9	B	1192	1231	Right-handed alpha
Helix 136	AP1	D	130	140	Right-handed alpha
Helix 137	AP2	D	163	181	Right-handed alpha
Helix 138	AP3	D	192	206	Right-handed alpha
Helix 139	AP4	D	227	231	Right-handed 310
Helix 140	AP5	D	271	285	Right-handed alpha
Helix 141	AP6	D	307	319	Right-handed alpha
Helix 142	AP7	D	334	345	Right-handed alpha
Helix 143	AP8	D	353	367	Right-handed alpha
Helix 144	AP9	D	371	386	Right-handed alpha
Helix 145	AQ1	D	404	416	Right-handed alpha
Helix 146	AQ2	D	420	431	Right-handed alpha
Helix 147	AQ3	D	434	440	Right-handed alpha
Helix 148	AQ4	D	452	462	Right-handed alpha
Helix 149	AQ5	D	465	474	Right-handed alpha
Helix 150	AQ6	D	478	483	Right-handed alpha
Helix 151	AQ7	D	484	494	Right-handed alpha
Helix 152	AQ8	D	501	512	Right-handed alpha
Helix 153	AQ9	D	533	546	Right-handed alpha
Helix 154	AR1	D	555	565	Right-handed alpha
Helix 155	AR2	D	613	625	Right-handed alpha
Helix 156	AR3	D	628	637	Right-handed alpha
Helix 157	AR4	D	640	662	Right-handed alpha
Helix 158	AR5	D	665	694	Right-handed alpha
Helix 159	AR6	D	695	704	Right-handed alpha
Helix 160	AR7	D	706	710	Right-handed 310
Helix 161	AR8	D	713	721	Right-handed alpha
Helix 162	AR9	D	723	729	Right-handed alpha
Helix 163	AS1	D	729	741	Right-handed alpha
Helix 164	AS2	D	752	760	Right-handed alpha
Helix 165	AS3	D	761	767	Right-handed 310
Helix 166	AS4	D	835	845	Right-handed alpha
Helix 167	AS5	D	847	872	Right-handed alpha
Helix 168	AS6	D	879	902	Right-handed alpha
Helix 169	AS7	D	907	917	Right-handed alpha
Helix 170	AS8	D	918	940	Right-handed alpha
Helix 171	AS9	D	943	968	Right-handed alpha
Helix 172	AT1	D	973	1009	Right-handed alpha
Helix 173	AT2	D	1017	1025	Right-handed alpha
Helix 174	AT3	D	1025	1030	Right-handed alpha
Helix 175	AT4	D	1031	1033	Right-handed 310
Helix 176	AT5	D	1036	1040	Right-handed 310
Helix 177	AT6	D	1066	1080	Right-handed alpha
Helix 178	AT7	D	1082	1120	Right-handed alpha
Helix 179	AT8	D	1124	1127	Right-handed 310
Helix 180	AT9	D	1128	1145	Right-handed alpha
Helix 181	AU1	D	1163	1191	Right-handed alpha
Helix 182	AU2	D	1194	1232	Right-handed alpha

There are 8 sheets in PDB entry 9O83. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	40	first strand
Strand 2	A	99	102	anti-parallel

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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	240	first strand
Strand 2	A	105	112	parallel
Strand 3	A	119	126	anti-parallel
Strand 4	A	258	263	parallel
Strand 5	A	215	220	parallel
Strand 6	A	184	187	parallel
Strand 7	A	150	155	parallel
Strand 8	A	299	304	parallel
Strand 9	A	326	329	parallel
Strand 10	A	392	395	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	37	40	first strand
Strand 2	C	99	102	anti-parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	232	233	first strand
Strand 2	C	105	110	parallel
Strand 3	C	119	126	anti-parallel
Strand 4	C	258	263	parallel
Strand 5	C	215	220	parallel
Strand 6	C	184	187	parallel
Strand 7	C	150	154	parallel
Strand 8	C	299	303	parallel
Strand 9	C	326	329	parallel
Strand 10	C	392	395	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	41	first strand
Strand 2	B	98	101	anti-parallel

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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	233	240	first strand
Strand 2	B	106	112	parallel
Strand 3	B	119	126	anti-parallel
Strand 4	B	258	263	parallel
Strand 5	B	215	220	parallel
Strand 6	B	184	187	parallel
Strand 7	B	150	152	parallel
Strand 8	B	299	303	parallel
Strand 9	B	326	328	parallel
Strand 10	B	392	394	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	107	109	first strand
Strand 2	D	120	125	anti-parallel
Strand 3	D	258	262	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	215	216	first strand
Strand 2	D	184	186	parallel
Strand 3	D	150	154	parallel
Strand 4	D	300	303	parallel
Strand 5	D	326	327	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9O83

Analysis of interatomic Contacts of Structural Units in PDB entry:
9O83