Analysis of interatomic Contacts of Structural Units in PDB entry:
9O8N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9O8N entry

There is 1 chain in PDB entry 9O8N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 1LEU 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 9O8N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 15Right-handed alpha
Helix 2
AA2
A
16 19Right-handed 310
Helix 3
AA3
A
25 41Right-handed alpha
Helix 4
AA4
A
57 70Right-handed alpha
Helix 5
AA5
A
95 103Right-handed alpha
Helix 6
AA6
A
258 265Right-handed alpha
Helix 7
AA7
A
267 271Right-handed 310
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There are 5 sheets in PDB entry 9O8N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 50first strand
Strand 2
A
53 56anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 78first strand
Strand 2
A
81 85anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 106first strand
Strand 2
A
123 124parallel
Strand 3
A
140 141parallel
Strand 4
A
158 159parallel
Strand 5
A
184 185parallel
Strand 6
A
202 203parallel
Strand 7
A
232 240parallel
Strand 8
A
247 256anti-parallel
Strand 9
A
215 217parallel
Strand 10
A
222 224anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 112first strand
Strand 2
A
127 129parallel
Strand 3
A
145 147parallel
Strand 4
A
164 165parallel
Strand 5
A
190 191parallel
Strand 6
A
208 209parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
134 135parallel
Strand 3
A
152 153parallel
Strand 4
A
178 179parallel
Strand 5
A
196 197parallel
Strand 6
A
227 228parallel
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