Analysis of interatomic Contacts of Structural Units in PDB entry:
9OA1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9OA1 entry

There are 11 chains in PDB entry 9OA1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 25	TYR 468
B	GLU 16	TYR 468
C	PRO 19	TYR 468
D	ASP 18	TYR 468
E	PRO 19	TYR 468
F	LEU 24	TYR 468
V	ILE 40	SER 232
W	ILE 40	SER 232
X	ILE 40	SER 232
Y	ALA 37	SER 232
Z	GLU 2	ALA 231

There are191 helices in PDB entry 9OA1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	44	Right-handed alpha
Helix 2	AA2	A	47	53	Right-handed alpha
Helix 3	AA3	A	56	60	Right-handed 310
Helix 4	AA4	A	62	78	Right-handed alpha
Helix 5	AA5	A	83	94	Right-handed alpha
Helix 6	AA6	A	96	101	Right-handed alpha
Helix 7	AA7	A	102	113	Right-handed alpha
Helix 8	AA8	A	118	148	Right-handed alpha
Helix 9	AA9	A	153	172	Right-handed alpha
Helix 10	AB1	A	211	219	Right-handed alpha
Helix 11	AB2	A	236	251	Right-handed alpha
Helix 12	AB3	A	264	278	Right-handed alpha
Helix 13	AB4	A	280	287	Right-handed alpha
Helix 14	AB5	A	290	308	Right-handed alpha
Helix 15	AB6	A	319	335	Right-handed alpha
Helix 16	AB7	A	344	348	Right-handed 310
Helix 17	AB8	A	350	354	Right-handed 310
Helix 18	AB9	A	356	376	Right-handed alpha
Helix 19	AC1	A	386	392	Right-handed 310
Helix 20	AC2	A	398	403	Right-handed 310
Helix 21	AC3	A	405	412	Right-handed alpha
Helix 22	AC4	A	421	425	Right-handed alpha
Helix 23	AC5	B	30	44	Right-handed alpha
Helix 24	AC6	B	47	53	Right-handed alpha
Helix 25	AC7	B	56	60	Right-handed 310
Helix 26	AC8	B	62	79	Right-handed alpha
Helix 27	AC9	B	83	94	Right-handed alpha
Helix 28	AD1	B	96	101	Right-handed alpha
Helix 29	AD2	B	101	113	Right-handed alpha
Helix 30	AD3	B	118	148	Right-handed alpha
Helix 31	AD4	B	153	167	Right-handed alpha
Helix 32	AD5	B	182	199	Right-handed alpha
Helix 33	AD6	B	211	219	Right-handed alpha
Helix 34	AD7	B	236	252	Right-handed alpha
Helix 35	AD8	B	264	278	Right-handed alpha
Helix 36	AD9	B	280	287	Right-handed alpha
Helix 37	AE1	B	290	308	Right-handed alpha
Helix 38	AE2	B	319	335	Right-handed alpha
Helix 39	AE3	B	344	348	Right-handed 310
Helix 40	AE4	B	356	376	Right-handed alpha
Helix 41	AE5	B	386	392	Right-handed 310
Helix 42	AE6	B	398	403	Right-handed 310
Helix 43	AE7	B	405	412	Right-handed alpha
Helix 44	AE8	B	421	425	Right-handed alpha
Helix 45	AE9	C	30	44	Right-handed alpha
Helix 46	AF1	C	47	53	Right-handed alpha
Helix 47	AF2	C	56	60	Right-handed 310
Helix 48	AF3	C	62	78	Right-handed alpha
Helix 49	AF4	C	83	94	Right-handed alpha
Helix 50	AF5	C	96	101	Right-handed alpha
Helix 51	AF6	C	102	113	Right-handed alpha
Helix 52	AF7	C	118	126	Right-handed alpha
Helix 53	AF8	C	128	148	Right-handed alpha
Helix 54	AF9	C	153	169	Right-handed alpha
Helix 55	AG1	C	182	199	Right-handed alpha
Helix 56	AG2	C	211	219	Right-handed alpha
Helix 57	AG3	C	236	251	Right-handed alpha
Helix 58	AG4	C	264	278	Right-handed alpha
Helix 59	AG5	C	280	287	Right-handed alpha
Helix 60	AG6	C	290	308	Right-handed alpha
Helix 61	AG7	C	319	335	Right-handed alpha
Helix 62	AG8	C	344	348	Right-handed 310
Helix 63	AG9	C	350	354	Right-handed 310
Helix 64	AH1	C	356	376	Right-handed alpha
Helix 65	AH2	C	386	392	Right-handed 310
Helix 66	AH3	C	398	402	Right-handed 310
Helix 67	AH4	C	405	412	Right-handed alpha
Helix 68	AH5	C	421	425	Right-handed alpha
Helix 69	AH6	D	30	44	Right-handed alpha
Helix 70	AH7	D	47	53	Right-handed alpha
Helix 71	AH8	D	56	60	Right-handed 310
Helix 72	AH9	D	62	79	Right-handed alpha
Helix 73	AI1	D	83	94	Right-handed alpha
Helix 74	AI2	D	96	101	Right-handed alpha
Helix 75	AI3	D	102	113	Right-handed alpha
Helix 76	AI4	D	118	148	Right-handed alpha
Helix 77	AI5	D	153	168	Right-handed alpha
Helix 78	AI6	D	182	199	Right-handed alpha
Helix 79	AI7	D	211	219	Right-handed alpha
Helix 80	AI8	D	236	251	Right-handed alpha
Helix 81	AI9	D	264	278	Right-handed alpha
Helix 82	AJ1	D	280	287	Right-handed alpha
Helix 83	AJ2	D	290	308	Right-handed alpha
Helix 84	AJ3	D	319	335	Right-handed alpha
Helix 85	AJ4	D	350	354	Right-handed 310
Helix 86	AJ5	D	356	376	Right-handed alpha
Helix 87	AJ6	D	386	392	Right-handed 310
Helix 88	AJ7	D	398	402	Right-handed 310
Helix 89	AJ8	D	405	412	Right-handed alpha
Helix 90	AJ9	D	421	425	Right-handed alpha
Helix 91	AK1	E	30	44	Right-handed alpha
Helix 92	AK2	E	47	53	Right-handed alpha
Helix 93	AK3	E	56	60	Right-handed 310
Helix 94	AK4	E	62	78	Right-handed alpha
Helix 95	AK5	E	83	94	Right-handed alpha
Helix 96	AK6	E	96	101	Right-handed alpha
Helix 97	AK7	E	101	113	Right-handed alpha
Helix 98	AK8	E	118	148	Right-handed alpha
Helix 99	AK9	E	153	170	Right-handed alpha
Helix 100	AL1	E	182	199	Right-handed alpha
Helix 101	AL2	E	211	219	Right-handed alpha
Helix 102	AL3	E	236	251	Right-handed alpha
Helix 103	AL4	E	264	278	Right-handed alpha
Helix 104	AL5	E	280	287	Right-handed alpha
Helix 105	AL6	E	290	308	Right-handed alpha
Helix 106	AL7	E	319	335	Right-handed alpha
Helix 107	AL8	E	344	348	Right-handed 310
Helix 108	AL9	E	350	354	Right-handed 310
Helix 109	AM1	E	356	376	Right-handed alpha
Helix 110	AM2	E	386	392	Right-handed 310
Helix 111	AM3	E	398	403	Right-handed 310
Helix 112	AM4	E	405	412	Right-handed alpha
Helix 113	AM5	E	421	425	Right-handed alpha
Helix 114	AM6	F	30	44	Right-handed alpha
Helix 115	AM7	F	47	53	Right-handed alpha
Helix 116	AM8	F	56	60	Right-handed 310
Helix 117	AM9	F	62	79	Right-handed alpha
Helix 118	AN1	F	83	94	Right-handed alpha
Helix 119	AN2	F	96	101	Right-handed alpha
Helix 120	AN3	F	102	113	Right-handed alpha
Helix 121	AN4	F	118	148	Right-handed alpha
Helix 122	AN5	F	153	171	Right-handed alpha
Helix 123	AN6	F	182	199	Right-handed alpha
Helix 124	AN7	F	211	219	Right-handed alpha
Helix 125	AN8	F	236	251	Right-handed alpha
Helix 126	AN9	F	264	278	Right-handed alpha
Helix 127	AO1	F	280	287	Right-handed alpha
Helix 128	AO2	F	290	308	Right-handed alpha
Helix 129	AO3	F	319	335	Right-handed alpha
Helix 130	AO4	F	344	348	Right-handed 310
Helix 131	AO5	F	350	354	Right-handed 310
Helix 132	AO6	F	356	376	Right-handed alpha
Helix 133	AO7	F	386	392	Right-handed 310
Helix 134	AO8	F	398	403	Right-handed 310
Helix 135	AO9	F	405	412	Right-handed alpha
Helix 136	AP1	F	421	425	Right-handed alpha
Helix 137	AP2	V	41	51	Right-handed alpha
Helix 138	AP3	V	52	56	Right-handed 310
Helix 139	AP4	V	59	78	Right-handed alpha
Helix 140	AP5	V	81	95	Right-handed alpha
Helix 141	AP6	V	102	113	Right-handed alpha
Helix 142	AP7	V	122	137	Right-handed alpha
Helix 143	AP8	V	138	140	Right-handed 310
Helix 144	AP9	V	150	168	Right-handed alpha
Helix 145	AQ1	V	170	192	Right-handed alpha
Helix 146	AQ2	V	211	226	Right-handed alpha
Helix 147	AQ3	W	41	51	Right-handed alpha
Helix 148	AQ4	W	52	56	Right-handed 310
Helix 149	AQ5	W	59	78	Right-handed alpha
Helix 150	AQ6	W	81	95	Right-handed alpha
Helix 151	AQ7	W	102	113	Right-handed alpha
Helix 152	AQ8	W	122	137	Right-handed alpha
Helix 153	AQ9	W	138	140	Right-handed 310
Helix 154	AR1	W	142	146	Right-handed 310
Helix 155	AR2	W	150	168	Right-handed alpha
Helix 156	AR3	W	170	191	Right-handed alpha
Helix 157	AR4	W	211	227	Right-handed alpha
Helix 158	AR5	X	41	51	Right-handed alpha
Helix 159	AR6	X	52	56	Right-handed 310
Helix 160	AR7	X	59	78	Right-handed alpha
Helix 161	AR8	X	81	95	Right-handed alpha
Helix 162	AR9	X	102	115	Right-handed alpha
Helix 163	AS1	X	122	137	Right-handed alpha
Helix 164	AS2	X	138	140	Right-handed 310
Helix 165	AS3	X	150	168	Right-handed alpha
Helix 166	AS4	X	170	191	Right-handed alpha
Helix 167	AS5	X	211	227	Right-handed alpha
Helix 168	AS6	X	228	232	Right-handed 310
Helix 169	AS7	Y	38	51	Right-handed alpha
Helix 170	AS8	Y	52	56	Right-handed 310
Helix 171	AS9	Y	59	78	Right-handed alpha
Helix 172	AT1	Y	81	95	Right-handed alpha
Helix 173	AT2	Y	102	115	Right-handed alpha
Helix 174	AT3	Y	122	137	Right-handed alpha
Helix 175	AT4	Y	138	140	Right-handed 310
Helix 176	AT5	Y	150	168	Right-handed alpha
Helix 177	AT6	Y	170	191	Right-handed alpha
Helix 178	AT7	Y	211	227	Right-handed alpha
Helix 179	AT8	Z	3	15	Right-handed alpha
Helix 180	AT9	Z	15	22	Right-handed alpha
Helix 181	AU1	Z	32	51	Right-handed alpha
Helix 182	AU2	Z	52	56	Right-handed 310
Helix 183	AU3	Z	59	78	Right-handed alpha
Helix 184	AU4	Z	81	95	Right-handed alpha
Helix 185	AU5	Z	102	118	Right-handed alpha
Helix 186	AU6	Z	122	137	Right-handed alpha
Helix 187	AU7	Z	138	140	Right-handed 310
Helix 188	AU8	Z	142	146	Right-handed 310
Helix 189	AU9	Z	150	168	Right-handed alpha
Helix 190	AV1	Z	170	191	Right-handed alpha
Helix 191	AV2	Z	211	227	Right-handed alpha

There are 6 sheets in PDB entry 9OA1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	459	462	first strand
Strand 2	A	448	454	anti-parallel
Strand 3	A	433	441	anti-parallel
Strand 4	A	414	420	anti-parallel
Strand 5	A	226	231	parallel
Strand 6	A	379	384	parallel
Strand 7	A	339	343	parallel
Strand 8	A	256	260	parallel
Strand 9	A	310	313	parallel
Strand 10	F	180	181	anti-parallel

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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	180	181	first strand
Strand 2	C	310	313	anti-parallel
Strand 3	C	256	260	parallel
Strand 4	C	339	343	parallel
Strand 5	C	379	384	parallel
Strand 6	C	226	231	parallel
Strand 7	C	414	420	parallel
Strand 8	C	433	441	anti-parallel
Strand 9	C	448	454	anti-parallel
Strand 10	C	459	462	anti-parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	310	313	first strand
Strand 2	B	256	260	parallel
Strand 3	B	339	343	parallel
Strand 4	B	379	383	parallel
Strand 5	B	226	230	parallel
Strand 6	B	414	420	parallel
Strand 7	B	433	441	anti-parallel
Strand 8	B	448	454	anti-parallel
Strand 9	B	459	462	anti-parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	180	181	first strand
Strand 2	D	310	313	anti-parallel
Strand 3	D	256	260	parallel
Strand 4	D	339	343	parallel
Strand 5	D	379	384	parallel
Strand 6	D	226	231	parallel
Strand 7	D	414	420	parallel
Strand 8	D	433	441	anti-parallel
Strand 9	D	448	454	anti-parallel
Strand 10	D	459	462	anti-parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	180	181	first strand
Strand 2	E	310	313	anti-parallel
Strand 3	E	256	260	parallel
Strand 4	E	339	343	parallel
Strand 5	E	379	384	parallel
Strand 6	E	226	231	parallel
Strand 7	E	414	420	parallel
Strand 8	E	433	441	anti-parallel
Strand 9	E	448	454	anti-parallel
Strand 10	E	459	462	anti-parallel

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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	180	181	first strand
Strand 2	F	310	313	anti-parallel
Strand 3	F	256	260	parallel
Strand 4	F	339	343	parallel
Strand 5	F	379	384	parallel
Strand 6	F	226	231	parallel
Strand 7	F	414	420	parallel
Strand 8	F	433	441	anti-parallel
Strand 9	F	448	454	anti-parallel
Strand 10	F	459	462	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9OA1

Analysis of interatomic Contacts of Structural Units in PDB entry:
9OA1