Analysis of interatomic Contacts of Structural Units in PDB entry:
9OC1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OC1 entry

There are 4 chains in PDB entry 9OC1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 550LYS 838
B
 VAL 545GLN 845
C
 THR 550LYS 838
D
 VAL 545GLN 845
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 9OC1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
559 583Right-handed alpha
Helix 2
AA2
A
603 615Right-handed alpha
Helix 3
AA3
A
626 657Right-handed alpha
Helix 4
AA4
A
813 838Right-handed alpha
Helix 5
AA5
B
555 579Right-handed alpha
Helix 6
AA6
B
601 613Right-handed alpha
Helix 7
AA7
B
625 656Right-handed alpha
Helix 8
AA8
B
818 845Right-handed alpha
Helix 9
AA9
C
559 583Right-handed alpha
Helix 10
AB1
C
603 615Right-handed alpha
Helix 11
AB2
C
626 657Right-handed alpha
Helix 12
AB3
C
813 838Right-handed alpha
Helix 13
AB4
D
555 579Right-handed alpha
Helix 14
AB5
D
601 613Right-handed alpha
Helix 15
AB6
D
625 656Right-handed alpha
Helix 16
AB7
D
818 845Right-handed alpha
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There are no sheets in PDB entry 9OC1
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il