Analysis of interatomic Contacts of Structural Units in PDB entry:
9OC6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OC6 entry

There are 3 chains in PDB entry 9OC6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 LEU 5LEU 267
D
 ILE 1MET 99
A
 GLU 3THR 213
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 9OC6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
49 53Right-handed 310
Helix 2
AA2
C
58 82Right-handed alpha
Helix 3
AA3
C
133 143Right-handed alpha
Helix 4
AA4
C
146 157Right-handed alpha
Helix 5
AA5
C
157 167Right-handed alpha
Helix 6
AA6
A
32 35Right-handed 310
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There are 10 sheets in PDB entry 9OC6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 47first strand
Strand 2
C
33 39anti-parallel
Strand 3
C
24 30anti-parallel
Strand 4
C
6 14anti-parallel
Strand 5
C
89 97anti-parallel
Strand 6
C
107 112anti-parallel
Strand 7
C
115 121anti-parallel
Strand 8
C
126 128anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
181 184first strand
Strand 2
C
198 203anti-parallel
Strand 3
C
234 238anti-parallel
Strand 4
C
225 228anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
208 209first strand
Strand 2
C
252 256anti-parallel
Strand 3
C
263 265anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 11first strand
Strand 2
D
21 30anti-parallel
Strand 3
D
62 70anti-parallel
Strand 4
D
50 51anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 11first strand
Strand 2
D
21 30anti-parallel
Strand 3
D
62 70anti-parallel
Strand 4
D
55 56anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
44 45first strand
Strand 2
D
36 41anti-parallel
Strand 3
D
78 83anti-parallel
Strand 4
D
91 94anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 48first strand
Strand 2
A
37 42anti-parallel
Strand 3
A
78 81anti-parallel
Strand 4
A
85 98anti-parallel
Strand 5
A
103 114anti-parallel
Strand 6
A
158 168anti-parallel
Strand 7
A
51 61anti-parallel
Strand 8
A
67 68anti-parallel
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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 48first strand
Strand 2
A
37 42anti-parallel
Strand 3
A
78 81anti-parallel
Strand 4
A
85 98anti-parallel
Strand 5
A
206 212anti-parallel
Strand 6
A
4 11anti-parallel
Strand 7
A
51 61anti-parallel
Strand 8
A
67 68anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 27first strand
Strand 2
A
118 125anti-parallel
Strand 3
A
147 153anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 128first strand
Strand 2
A
141 142anti-parallel
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