Analysis of interatomic Contacts of Structural Units in PDB entry:
9ODZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ODZ entry

There is 1 chain in PDB entry 9ODZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 36SER 1274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 9ODZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 44Right-handed 310
Helix 2
AA2
A
49 68Right-handed alpha
Helix 3
AA3
A
72 79Right-handed alpha
Helix 4
AA4
A
119 160Right-handed alpha
Helix 5
AA5
A
164 171Right-handed alpha
Helix 6
AA6
A
172 183Right-handed alpha
Helix 7
AA7
A
183 191Right-handed alpha
Helix 8
AA8
A
192 215Right-handed alpha
Helix 9
AA9
A
216 233Right-handed alpha
Helix 10
AB1
A
236 245Right-handed alpha
Helix 11
AB2
A
246 248Right-handed 310
Helix 12
AB3
A
253 265Right-handed alpha
Helix 13
AB4
A
265 272Right-handed alpha
Helix 14
AB5
A
274 323Right-handed alpha
Helix 15
AB6
A
324 326Right-handed 310
Helix 16
AB7
A
331 376Right-handed alpha
Helix 17
AB8
A
438 443Right-handed alpha
Helix 18
AB9
A
467 472Right-handed alpha
Helix 19
AC1
A
488 495Right-handed alpha
Helix 20
AC2
A
501 512Right-handed alpha
Helix 21
AC3
A
513 519Right-handed alpha
Helix 22
AC4
A
537 552Right-handed alpha
Helix 23
AC5
A
568 583Right-handed alpha
Helix 24
AC6
A
593 599Right-handed alpha
Helix 25
AC7
A
615 624Right-handed alpha
Helix 26
AC8
A
625 637Right-handed alpha
Helix 27
AC9
A
695 703Right-handed alpha
Helix 28
AD1
A
706 738Right-handed alpha
Helix 29
AD2
A
742 797Right-handed alpha
Helix 30
AD3
A
798 803Right-handed alpha
Helix 31
AD4
A
808 819Right-handed alpha
Helix 32
AD5
A
822 826Right-handed 310
Helix 33
AD6
A
828 852Right-handed alpha
Helix 34
AD7
A
852 900Right-handed alpha
Helix 35
AD8
A
901 909Right-handed alpha
Helix 36
AD9
A
911 922Right-handed alpha
Helix 37
AE1
A
922 963Right-handed alpha
Helix 38
AE2
A
968 992Right-handed alpha
Helix 39
AE3
A
993 1011Right-handed alpha
Helix 40
AE4
A
1074 1082Right-handed alpha
Helix 41
AE5
A
1103 1108Right-handed alpha
Helix 42
AE6
A
1124 1132Right-handed alpha
Helix 43
AE7
A
1139 1150Right-handed alpha
Helix 44
AE8
A
1152 1158Right-handed alpha
Helix 45
AE9
A
1175 1189Right-handed alpha
Helix 46
AF1
A
1205 1220Right-handed alpha
Helix 47
AF2
A
1231 1236Right-handed 310
Helix 48
AF3
A
1254 1260Right-handed alpha
Helix 49
AF4
A
1262 1273Right-handed alpha
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There are 4 sheets in PDB entry 9ODZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
421 422first strand
Strand 2
A
397 403anti-parallel
Strand 3
A
453 456anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
427 429first strand
Strand 2
A
587 590parallel
Strand 3
A
558 560parallel
Strand 4
A
477 478parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1058 1059first strand
Strand 2
A
1032 1036anti-parallel
Strand 3
A
1091 1094anti-parallel
Strand 4
A
1097 1098anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1244 1245first strand
Strand 2
A
1248 1249anti-parallel
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