Analysis of interatomic Contacts of Structural Units in PDB entry:
9OE0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OE0 entry

There is 1 chain in PDB entry 9OE0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 35HIS 1275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 9OE0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 46Right-handed 310
Helix 2
AA2
A
49 68Right-handed alpha
Helix 3
AA3
A
68 79Right-handed alpha
Helix 4
AA4
A
118 158Right-handed alpha
Helix 5
AA5
A
164 171Right-handed alpha
Helix 6
AA6
A
173 191Right-handed alpha
Helix 7
AA7
A
192 216Right-handed alpha
Helix 8
AA8
A
216 233Right-handed alpha
Helix 9
AA9
A
235 245Right-handed alpha
Helix 10
AB1
A
252 264Right-handed alpha
Helix 11
AB2
A
265 273Right-handed alpha
Helix 12
AB3
A
274 322Right-handed alpha
Helix 13
AB4
A
332 351Right-handed alpha
Helix 14
AB5
A
352 376Right-handed alpha
Helix 15
AB6
A
438 444Right-handed alpha
Helix 16
AB7
A
462 466Right-handed 310
Helix 17
AB8
A
467 474Right-handed alpha
Helix 18
AB9
A
488 495Right-handed alpha
Helix 19
AC1
A
500 512Right-handed alpha
Helix 20
AC2
A
514 519Right-handed alpha
Helix 21
AC3
A
537 552Right-handed alpha
Helix 22
AC4
A
567 582Right-handed alpha
Helix 23
AC5
A
616 623Right-handed alpha
Helix 24
AC6
A
625 638Right-handed alpha
Helix 25
AC7
A
695 702Right-handed alpha
Helix 26
AC8
A
703 705Right-handed 310
Helix 27
AC9
A
706 737Right-handed alpha
Helix 28
AD1
A
742 784Right-handed alpha
Helix 29
AD2
A
784 792Right-handed alpha
Helix 30
AD3
A
798 804Right-handed alpha
Helix 31
AD4
A
810 818Right-handed alpha
Helix 32
AD5
A
818 823Right-handed alpha
Helix 33
AD6
A
823 828Right-handed alpha
Helix 34
AD7
A
828 851Right-handed alpha
Helix 35
AD8
A
852 899Right-handed alpha
Helix 36
AD9
A
901 909Right-handed alpha
Helix 37
AE1
A
912 924Right-handed alpha
Helix 38
AE2
A
926 964Right-handed alpha
Helix 39
AE3
A
968 990Right-handed alpha
Helix 40
AE4
A
995 1011Right-handed alpha
Helix 41
AE5
A
1075 1080Right-handed alpha
Helix 42
AE6
A
1081 1083Right-handed 310
Helix 43
AE7
A
1103 1108Right-handed alpha
Helix 44
AE8
A
1124 1131Right-handed alpha
Helix 45
AE9
A
1139 1149Right-handed alpha
Helix 46
AF1
A
1152 1157Right-handed alpha
Helix 47
AF2
A
1175 1191Right-handed alpha
Helix 48
AF3
A
1205 1221Right-handed alpha
Helix 49
AF4
A
1254 1262Right-handed alpha
Helix 50
AF5
A
1262 1275Right-handed alpha
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There are 5 sheets in PDB entry 9OE0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 421first strand
Strand 2
A
397 404anti-parallel
Strand 3
A
457 458anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 432first strand
Strand 2
A
603 606parallel
Strand 3
A
611 615anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 478first strand
Strand 2
A
556 559parallel
Strand 3
A
586 587parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1038 1039first strand
Strand 2
A
1052 1053anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1111 1114first strand
Strand 2
A
1194 1197parallel
Strand 3
A
1224 1227parallel
Strand 4
A
1063 1067parallel
Strand 5
A
1241 1244parallel
Strand 6
A
1249 1253anti-parallel
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