Analysis of interatomic Contacts of Structural Units in PDB entry:
9OE4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OE4 entry

There is 1 chain in PDB entry 9OE4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 35SER 1274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 9OE4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 96Right-handed alpha
Helix 2
AA2
A
111 162Right-handed alpha
Helix 3
AA3
A
164 171Right-handed alpha
Helix 4
AA4
A
172 191Right-handed alpha
Helix 5
AA5
A
192 216Right-handed alpha
Helix 6
AA6
A
216 265Right-handed alpha
Helix 7
AA7
A
265 272Right-handed alpha
Helix 8
AA8
A
274 327Right-handed alpha
Helix 9
AA9
A
332 353Right-handed alpha
Helix 10
AB1
A
353 376Right-handed alpha
Helix 11
AB2
A
437 445Right-handed alpha
Helix 12
AB3
A
468 473Right-handed alpha
Helix 13
AB4
A
488 495Right-handed alpha
Helix 14
AB5
A
501 512Right-handed alpha
Helix 15
AB6
A
513 520Right-handed alpha
Helix 16
AB7
A
537 551Right-handed alpha
Helix 17
AB8
A
570 579Right-handed alpha
Helix 18
AB9
A
593 598Right-handed alpha
Helix 19
AC1
A
616 622Right-handed alpha
Helix 20
AC2
A
626 638Right-handed alpha
Helix 21
AC3
A
695 702Right-handed alpha
Helix 22
AC4
A
703 705Right-handed 310
Helix 23
AC5
A
706 736Right-handed alpha
Helix 24
AC6
A
737 740Right-handed 310
Helix 25
AC7
A
742 797Right-handed alpha
Helix 26
AC8
A
798 804Right-handed alpha
Helix 27
AC9
A
805 807Right-handed 310
Helix 28
AD1
A
808 816Right-handed alpha
Helix 29
AD2
A
822 826Right-handed 310
Helix 30
AD3
A
827 851Right-handed alpha
Helix 31
AD4
A
852 901Right-handed alpha
Helix 32
AD5
A
901 909Right-handed alpha
Helix 33
AD6
A
910 921Right-handed alpha
Helix 34
AD7
A
922 964Right-handed alpha
Helix 35
AD8
A
968 992Right-handed alpha
Helix 36
AD9
A
995 1012Right-handed alpha
Helix 37
AE1
A
1073 1082Right-handed alpha
Helix 38
AE2
A
1103 1110Right-handed alpha
Helix 39
AE3
A
1124 1131Right-handed alpha
Helix 40
AE4
A
1140 1150Right-handed alpha
Helix 41
AE5
A
1152 1158Right-handed alpha
Helix 42
AE6
A
1161 1165Right-handed 310
Helix 43
AE7
A
1177 1190Right-handed alpha
Helix 44
AE8
A
1205 1220Right-handed alpha
Helix 45
AE9
A
1254 1259Right-handed alpha
Helix 46
AF1
A
1264 1269Right-handed alpha
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There are 4 sheets in PDB entry 9OE4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
420 422first strand
Strand 2
A
397 400anti-parallel
Strand 3
A
455 458anti-parallel
Strand 4
A
461 462anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 478first strand
Strand 2
A
556 560parallel
Strand 3
A
586 590parallel
Strand 4
A
427 432parallel
Strand 5
A
602 607parallel
Strand 6
A
610 615anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1051 1057first strand
Strand 2
A
1033 1040anti-parallel
Strand 3
A
1092 1094anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1111 1114first strand
Strand 2
A
1194 1198parallel
Strand 3
A
1224 1228parallel
Strand 4
A
1063 1068parallel
Strand 5
A
1241 1244parallel
Strand 6
A
1249 1253anti-parallel
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