Analysis of interatomic Contacts of Structural Units in PDB entry:
9OE7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OE7 entry

There is 1 chain in PDB entry 9OE7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 36HIS 1275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 48 helices in PDB entry 9OE7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 46Right-handed 310
Helix 2
AA2
A
49 96Right-handed alpha
Helix 3
AA3
A
110 163Right-handed alpha
Helix 4
AA4
A
164 171Right-handed alpha
Helix 5
AA5
A
172 189Right-handed alpha
Helix 6
AA6
A
192 216Right-handed alpha
Helix 7
AA7
A
217 252Right-handed alpha
Helix 8
AA8
A
252 265Right-handed alpha
Helix 9
AA9
A
265 273Right-handed alpha
Helix 10
AB1
A
274 328Right-handed alpha
Helix 11
AB2
A
332 353Right-handed alpha
Helix 12
AB3
A
353 375Right-handed alpha
Helix 13
AB4
A
439 444Right-handed alpha
Helix 14
AB5
A
445 447Right-handed 310
Helix 15
AB6
A
467 473Right-handed 310
Helix 16
AB7
A
488 493Right-handed alpha
Helix 17
AB8
A
494 497Right-handed 310
Helix 18
AB9
A
501 512Right-handed alpha
Helix 19
AC1
A
514 518Right-handed 310
Helix 20
AC2
A
537 550Right-handed alpha
Helix 21
AC3
A
567 582Right-handed alpha
Helix 22
AC4
A
616 624Right-handed alpha
Helix 23
AC5
A
625 638Right-handed alpha
Helix 24
AC6
A
695 702Right-handed alpha
Helix 25
AC7
A
706 738Right-handed alpha
Helix 26
AC8
A
742 797Right-handed alpha
Helix 27
AC9
A
800 807Right-handed 310
Helix 28
AD1
A
808 822Right-handed alpha
Helix 29
AD2
A
823 828Right-handed alpha
Helix 30
AD3
A
828 852Right-handed alpha
Helix 31
AD4
A
853 880Right-handed alpha
Helix 32
AD5
A
881 901Right-handed alpha
Helix 33
AD6
A
901 907Right-handed alpha
Helix 34
AD7
A
912 964Right-handed alpha
Helix 35
AD8
A
968 991Right-handed alpha
Helix 36
AD9
A
995 1012Right-handed alpha
Helix 37
AE1
A
1075 1081Right-handed alpha
Helix 38
AE2
A
1103 1110Right-handed alpha
Helix 39
AE3
A
1124 1131Right-handed alpha
Helix 40
AE4
A
1132 1134Right-handed 310
Helix 41
AE5
A
1139 1150Right-handed alpha
Helix 42
AE6
A
1153 1157Right-handed 310
Helix 43
AE7
A
1161 1165Right-handed 310
Helix 44
AE8
A
1175 1190Right-handed alpha
Helix 45
AE9
A
1205 1220Right-handed alpha
Helix 46
AF1
A
1232 1237Right-handed alpha
Helix 47
AF2
A
1254 1262Right-handed alpha
Helix 48
AF3
A
1262 1273Right-handed alpha
Back to top of page

There are 7 sheets in PDB entry 9OE7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 421first strand
Strand 2
A
398 403anti-parallel
Strand 3
A
453 455anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
430 432first strand
Strand 2
A
603 607parallel
Strand 3
A
610 615anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 458first strand
Strand 2
A
461 462anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 478first strand
Strand 2
A
556 559parallel
Strand 3
A
586 589parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1038 1040first strand
Strand 2
A
1051 1054anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1112 1114first strand
Strand 2
A
1194 1198parallel
Strand 3
A
1224 1228parallel
Strand 4
A
1063 1066parallel
Strand 5
A
1240 1242parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1093 1094first strand
Strand 2
A
1097 1098anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il