Analysis of interatomic Contacts of Structural Units in PDB entry:
9OE9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OE9 entry

There is 1 chain in PDB entry 9OE9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 36SER 1274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 9OE9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 46Right-handed 310
Helix 2
AA2
A
49 83Right-handed alpha
Helix 3
AA3
A
117 162Right-handed alpha
Helix 4
AA4
A
164 171Right-handed alpha
Helix 5
AA5
A
172 193Right-handed alpha
Helix 6
AA6
A
193 216Right-handed alpha
Helix 7
AA7
A
217 227Right-handed alpha
Helix 8
AA8
A
228 232Right-handed 310
Helix 9
AA9
A
236 242Right-handed alpha
Helix 10
AB1
A
246 265Right-handed alpha
Helix 11
AB2
A
265 273Right-handed alpha
Helix 12
AB3
A
274 325Right-handed alpha
Helix 13
AB4
A
332 352Right-handed alpha
Helix 14
AB5
A
353 376Right-handed alpha
Helix 15
AB6
A
439 446Right-handed alpha
Helix 16
AB7
A
462 466Right-handed 310
Helix 17
AB8
A
467 474Right-handed alpha
Helix 18
AB9
A
488 495Right-handed alpha
Helix 19
AC1
A
501 512Right-handed alpha
Helix 20
AC2
A
537 553Right-handed alpha
Helix 21
AC3
A
567 582Right-handed alpha
Helix 22
AC4
A
593 599Right-handed alpha
Helix 23
AC5
A
616 624Right-handed alpha
Helix 24
AC6
A
625 638Right-handed alpha
Helix 25
AC7
A
695 704Right-handed alpha
Helix 26
AC8
A
706 740Right-handed alpha
Helix 27
AC9
A
742 795Right-handed alpha
Helix 28
AD1
A
798 803Right-handed alpha
Helix 29
AD2
A
804 807Right-handed 310
Helix 30
AD3
A
808 852Right-handed alpha
Helix 31
AD4
A
853 901Right-handed alpha
Helix 32
AD5
A
901 909Right-handed alpha
Helix 33
AD6
A
911 964Right-handed alpha
Helix 34
AD7
A
968 992Right-handed alpha
Helix 35
AD8
A
992 1012Right-handed alpha
Helix 36
AD9
A
1073 1082Right-handed alpha
Helix 37
AE1
A
1103 1110Right-handed alpha
Helix 38
AE2
A
1124 1129Right-handed alpha
Helix 39
AE3
A
1130 1133Right-handed 310
Helix 40
AE4
A
1139 1150Right-handed alpha
Helix 41
AE5
A
1152 1158Right-handed alpha
Helix 42
AE6
A
1175 1189Right-handed alpha
Helix 43
AE7
A
1205 1221Right-handed alpha
Helix 44
AE8
A
1231 1236Right-handed alpha
Helix 45
AE9
A
1254 1261Right-handed alpha
Helix 46
AF1
A
1262 1274Right-handed alpha
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There are 5 sheets in PDB entry 9OE9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 398first strand
Strand 2
A
421 422anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
428 430first strand
Strand 2
A
602 604parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 476first strand
Strand 2
A
556 557parallel
Strand 3
A
586 587parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1051 1058first strand
Strand 2
A
1033 1040anti-parallel
Strand 3
A
1089 1094anti-parallel
Strand 4
A
1097 1098anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1112 1114first strand
Strand 2
A
1194 1197parallel
Strand 3
A
1224 1228parallel
Strand 4
A
1063 1067parallel
Strand 5
A
1240 1245parallel
Strand 6
A
1248 1253anti-parallel
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