Analysis of interatomic Contacts of Structural Units in PDB entry:
9OET


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OET entry

There are 2 chains in PDB entry 9OET (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 ASP 2THR 239
A
 ASP 2ARG 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 9OET. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
4 18Right-handed alpha
Helix 2
AA2
D
19 34Right-handed alpha
Helix 3
AA3
D
46 73Right-handed alpha
Helix 4
AA4
D
86 92Right-handed alpha
Helix 5
AA5
D
93 101Right-handed alpha
Helix 6
AA6
D
102 114Right-handed alpha
Helix 7
AA7
D
122 125Right-handed 310
Helix 8
AA8
D
158 162Right-handed 310
Helix 9
AA9
D
179 187Right-handed alpha
Helix 10
AB1
D
230 239Right-handed alpha
Helix 11
AB2
A
5 18Right-handed alpha
Helix 12
AB3
A
19 34Right-handed alpha
Helix 13
AB4
A
46 62Right-handed alpha
Helix 14
AB5
A
86 91Right-handed alpha
Helix 15
AB6
A
93 101Right-handed alpha
Helix 16
AB7
A
102 114Right-handed alpha
Helix 17
AB8
A
158 162Right-handed 310
Helix 18
AB9
A
179 187Right-handed alpha
Helix 19
AC1
A
230 240Right-handed alpha
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There are 3 sheets in PDB entry 9OET. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
35 38first strand
Strand 2
D
198 203anti-parallel
Strand 3
D
148 155anti-parallel
Strand 4
D
221 228anti-parallel
Strand 5
D
127 132anti-parallel
Strand 6
D
83 85anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
208 211first strand
Strand 2
D
165 168anti-parallel
Strand 3
D
188 192anti-parallel
Strand 4
A
189 192anti-parallel
Strand 5
A
165 168anti-parallel
Strand 6
A
208 211anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 38first strand
Strand 2
A
198 203anti-parallel
Strand 3
A
148 155anti-parallel
Strand 4
A
221 228anti-parallel
Strand 5
A
127 132anti-parallel
Strand 6
A
84 85anti-parallel
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