Analysis of interatomic Contacts of Structural Units in PDB entry:
9OFC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9OFC entry

There are 12 chains in PDB entry 9OFC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLN 612
B	MET 1	GLU 611
C	A 707	A 707
D	A 709	A 709
G	MET 1	GLN 612
H	MET 1	GLU 611
I	A 717	A 717
J	A 719	A 719
K	MET 1	GLN 612
L	MET 1	GLU 611
M	A 727	A 727
N	A 729	A 729

There are181 helices in PDB entry 9OFC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	20	Right-handed alpha
Helix 2	AA2	A	39	53	Right-handed alpha
Helix 3	AA3	A	72	91	Right-handed alpha
Helix 4	AA4	A	93	95	Right-handed 310
Helix 5	AA5	A	105	120	Right-handed alpha
Helix 6	AA6	A	134	138	Right-handed 310
Helix 7	AA7	A	143	153	Right-handed alpha
Helix 8	AA8	A	196	216	Right-handed alpha
Helix 9	AA9	A	224	230	Right-handed 310
Helix 10	AB1	A	231	239	Right-handed alpha
Helix 11	AB2	A	247	254	Right-handed alpha
Helix 12	AB3	A	264	266	Right-handed 310
Helix 13	AB4	A	270	279	Right-handed alpha
Helix 14	AB5	A	305	314	Right-handed alpha
Helix 15	AB6	A	318	323	Right-handed alpha
Helix 16	AB7	A	324	342	Right-handed alpha
Helix 17	AB8	A	352	357	Right-handed alpha
Helix 18	AB9	A	362	380	Right-handed alpha
Helix 19	AC1	A	403	420	Right-handed alpha
Helix 20	AC2	A	445	447	Right-handed 310
Helix 21	AC3	A	448	455	Right-handed alpha
Helix 22	AC4	A	468	477	Right-handed alpha
Helix 23	AC5	A	498	503	Right-handed alpha
Helix 24	AC6	A	509	517	Right-handed alpha
Helix 25	AC7	A	532	539	Right-handed alpha
Helix 26	AC8	A	549	554	Right-handed alpha
Helix 27	AC9	A	556	568	Right-handed alpha
Helix 28	AD1	A	572	587	Right-handed alpha
Helix 29	AD2	A	590	602	Right-handed alpha
Helix 30	AD3	B	13	19	Right-handed alpha
Helix 31	AD4	B	20	21	Right-handed 310
Helix 32	AD5	B	22	26	Right-handed 310
Helix 33	AD6	B	37	39	Right-handed 310
Helix 34	AD7	B	40	54	Right-handed alpha
Helix 35	AD8	B	72	91	Right-handed alpha
Helix 36	AD9	B	93	95	Right-handed 310
Helix 37	AE1	B	105	120	Right-handed alpha
Helix 38	AE2	B	143	154	Right-handed alpha
Helix 39	AE3	B	174	178	Right-handed 310
Helix 40	AE4	B	196	217	Right-handed alpha
Helix 41	AE5	B	218	222	Right-handed 310
Helix 42	AE6	B	224	230	Right-handed 310
Helix 43	AE7	B	231	239	Right-handed alpha
Helix 44	AE8	B	247	254	Right-handed alpha
Helix 45	AE9	B	264	266	Right-handed 310
Helix 46	AF1	B	270	278	Right-handed alpha
Helix 47	AF2	B	282	286	Right-handed 310
Helix 48	AF3	B	306	313	Right-handed alpha
Helix 49	AF4	B	324	341	Right-handed alpha
Helix 50	AF5	B	352	357	Right-handed 310
Helix 51	AF6	B	362	381	Right-handed alpha
Helix 52	AF7	B	382	386	Right-handed 310
Helix 53	AF8	B	403	420	Right-handed alpha
Helix 54	AF9	B	441	445	Right-handed 310
Helix 55	AG1	B	448	454	Right-handed alpha
Helix 56	AG2	B	468	478	Right-handed alpha
Helix 57	AG3	B	494	503	Right-handed alpha
Helix 58	AG4	B	509	517	Right-handed alpha
Helix 59	AG5	B	532	540	Right-handed alpha
Helix 60	AG6	B	549	554	Right-handed alpha
Helix 61	AG7	B	556	568	Right-handed alpha
Helix 62	AG8	B	572	586	Right-handed alpha
Helix 63	AG9	B	590	602	Right-handed alpha
Helix 64	AH1	G	13	19	Right-handed alpha
Helix 65	AH2	G	37	40	Right-handed 310
Helix 66	AH3	G	41	53	Right-handed alpha
Helix 67	AH4	G	72	91	Right-handed alpha
Helix 68	AH5	G	105	119	Right-handed alpha
Helix 69	AH6	G	134	138	Right-handed 310
Helix 70	AH7	G	143	154	Right-handed alpha
Helix 71	AH8	G	196	216	Right-handed alpha
Helix 72	AH9	G	224	230	Right-handed 310
Helix 73	AI1	G	231	239	Right-handed alpha
Helix 74	AI2	G	247	253	Right-handed alpha
Helix 75	AI3	G	264	266	Right-handed 310
Helix 76	AI4	G	269	278	Right-handed alpha
Helix 77	AI5	G	305	313	Right-handed alpha
Helix 78	AI6	G	318	323	Right-handed alpha
Helix 79	AI7	G	326	341	Right-handed alpha
Helix 80	AI8	G	362	380	Right-handed alpha
Helix 81	AI9	G	403	420	Right-handed alpha
Helix 82	AJ1	G	448	455	Right-handed alpha
Helix 83	AJ2	G	468	477	Right-handed alpha
Helix 84	AJ3	G	492	503	Right-handed alpha
Helix 85	AJ4	G	509	517	Right-handed alpha
Helix 86	AJ5	G	532	539	Right-handed alpha
Helix 87	AJ6	G	549	554	Right-handed alpha
Helix 88	AJ7	G	556	568	Right-handed alpha
Helix 89	AJ8	G	573	587	Right-handed alpha
Helix 90	AJ9	G	590	602	Right-handed alpha
Helix 91	AK1	H	17	21	Right-handed 310
Helix 92	AK2	H	37	39	Right-handed 310
Helix 93	AK3	H	40	54	Right-handed alpha
Helix 94	AK4	H	72	91	Right-handed alpha
Helix 95	AK5	H	105	120	Right-handed alpha
Helix 96	AK6	H	143	154	Right-handed alpha
Helix 97	AK7	H	167	171	Right-handed 310
Helix 98	AK8	H	196	215	Right-handed alpha
Helix 99	AK9	H	218	222	Right-handed 310
Helix 100	AL1	H	224	230	Right-handed 310
Helix 101	AL2	H	231	238	Right-handed alpha
Helix 102	AL3	H	247	252	Right-handed alpha
Helix 103	AL4	H	264	266	Right-handed 310
Helix 104	AL5	H	271	279	Right-handed alpha
Helix 105	AL6	H	282	286	Right-handed 310
Helix 106	AL7	H	305	313	Right-handed alpha
Helix 107	AL8	H	326	341	Right-handed alpha
Helix 108	AL9	H	352	357	Right-handed 310
Helix 109	AM1	H	362	380	Right-handed alpha
Helix 110	AM2	H	403	417	Right-handed alpha
Helix 111	AM3	H	448	454	Right-handed alpha
Helix 112	AM4	H	467	477	Right-handed alpha
Helix 113	AM5	H	488	491	Right-handed 310
Helix 114	AM6	H	492	503	Right-handed alpha
Helix 115	AM7	H	509	517	Right-handed alpha
Helix 116	AM8	H	532	539	Right-handed alpha
Helix 117	AM9	H	549	554	Right-handed alpha
Helix 118	AN1	H	556	568	Right-handed alpha
Helix 119	AN2	H	572	587	Right-handed alpha
Helix 120	AN3	H	590	602	Right-handed alpha
Helix 121	AN4	K	13	19	Right-handed alpha
Helix 122	AN5	K	40	53	Right-handed alpha
Helix 123	AN6	K	72	90	Right-handed alpha
Helix 124	AN7	K	105	120	Right-handed alpha
Helix 125	AN8	K	134	138	Right-handed 310
Helix 126	AN9	K	143	154	Right-handed alpha
Helix 127	AO1	K	174	178	Right-handed 310
Helix 128	AO2	K	196	217	Right-handed alpha
Helix 129	AO3	K	224	230	Right-handed 310
Helix 130	AO4	K	231	238	Right-handed alpha
Helix 131	AO5	K	247	254	Right-handed alpha
Helix 132	AO6	K	264	266	Right-handed 310
Helix 133	AO7	K	270	278	Right-handed alpha
Helix 134	AO8	K	307	314	Right-handed alpha
Helix 135	AO9	K	318	323	Right-handed alpha
Helix 136	AP1	K	324	342	Right-handed alpha
Helix 137	AP2	K	352	357	Right-handed 310
Helix 138	AP3	K	362	381	Right-handed alpha
Helix 139	AP4	K	403	420	Right-handed alpha
Helix 140	AP5	K	448	455	Right-handed alpha
Helix 141	AP6	K	467	477	Right-handed alpha
Helix 142	AP7	K	494	503	Right-handed alpha
Helix 143	AP8	K	509	517	Right-handed alpha
Helix 144	AP9	K	532	539	Right-handed alpha
Helix 145	AQ1	K	556	568	Right-handed alpha
Helix 146	AQ2	K	573	586	Right-handed alpha
Helix 147	AQ3	K	590	602	Right-handed alpha
Helix 148	AQ4	L	14	19	Right-handed alpha
Helix 149	AQ5	L	20	26	Right-handed 310
Helix 150	AQ6	L	40	54	Right-handed alpha
Helix 151	AQ7	L	72	91	Right-handed alpha
Helix 152	AQ8	L	93	95	Right-handed 310
Helix 153	AQ9	L	105	120	Right-handed alpha
Helix 154	AR1	L	143	154	Right-handed alpha
Helix 155	AR2	L	196	217	Right-handed alpha
Helix 156	AR3	L	218	222	Right-handed 310
Helix 157	AR4	L	224	230	Right-handed 310
Helix 158	AR5	L	231	236	Right-handed alpha
Helix 159	AR6	L	237	240	Right-handed 310
Helix 160	AR7	L	247	252	Right-handed alpha
Helix 161	AR8	L	264	266	Right-handed 310
Helix 162	AR9	L	271	279	Right-handed alpha
Helix 163	AS1	L	282	286	Right-handed 310
Helix 164	AS2	L	305	312	Right-handed alpha
Helix 165	AS3	L	313	315	Right-handed 310
Helix 166	AS4	L	324	342	Right-handed alpha
Helix 167	AS5	L	353	357	Right-handed 310
Helix 168	AS6	L	362	379	Right-handed alpha
Helix 169	AS7	L	380	381	Right-handed 310
Helix 170	AS8	L	382	386	Right-handed 310
Helix 171	AS9	L	404	418	Right-handed alpha
Helix 172	AT1	L	449	454	Right-handed alpha
Helix 173	AT2	L	469	477	Right-handed alpha
Helix 174	AT3	L	492	497	Right-handed alpha
Helix 175	AT4	L	497	502	Right-handed alpha
Helix 176	AT5	L	509	515	Right-handed alpha
Helix 177	AT6	L	532	539	Right-handed alpha
Helix 178	AT7	L	549	554	Right-handed alpha
Helix 179	AT8	L	556	568	Right-handed alpha
Helix 180	AT9	L	572	587	Right-handed alpha
Helix 181	AU1	L	590	602	Right-handed alpha

There are 12 sheets in PDB entry 9OFC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	160	first strand
Strand 2	A	123	129	anti-parallel
Strand 3	A	97	100	parallel
Strand 4	A	3	8	parallel
Strand 5	A	29	34	parallel
Strand 6	A	58	64	parallel
Strand 7	A	188	193	parallel
Strand 8	A	180	185	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	257	262	first strand
Strand 2	A	346	351	parallel
Strand 3	A	388	394	parallel
Strand 4	A	426	431	parallel
Strand 5	A	457	461	parallel
Strand 6	A	482	484	parallel
Strand 7	A	505	508	parallel
Strand 8	A	543	545	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	160	first strand
Strand 2	B	123	126	anti-parallel
Strand 3	B	97	100	parallel
Strand 4	B	3	7	parallel
Strand 5	B	29	35	parallel
Strand 6	B	58	64	parallel
Strand 7	B	188	192	parallel
Strand 8	B	181	185	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	261	262	first strand
Strand 2	B	346	351	parallel
Strand 3	B	388	393	parallel
Strand 4	B	426	429	parallel
Strand 5	B	457	460	parallel
Strand 6	B	482	484	parallel
Strand 7	B	505	508	parallel
Strand 8	B	542	545	parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	156	164	first strand
Strand 2	G	121	129	anti-parallel
Strand 3	G	97	100	parallel
Strand 4	G	3	8	parallel
Strand 5	G	29	34	parallel
Strand 6	G	58	64	parallel
Strand 7	G	188	192	parallel
Strand 8	G	181	185	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	256	262	first strand
Strand 2	G	344	351	parallel
Strand 3	G	388	394	parallel
Strand 4	G	426	431	parallel
Strand 5	G	457	460	parallel
Strand 6	G	482	484	parallel
Strand 7	G	505	508	parallel
Strand 8	G	542	545	parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	156	164	first strand
Strand 2	H	121	129	anti-parallel
Strand 3	H	97	100	parallel
Strand 4	H	3	7	parallel
Strand 5	H	29	33	parallel
Strand 6	H	58	64	parallel
Strand 7	H	189	192	parallel
Strand 8	H	181	184	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	256	262	first strand
Strand 2	H	344	351	parallel
Strand 3	H	388	394	parallel
Strand 4	H	426	431	parallel
Strand 5	H	457	461	parallel
Strand 6	H	482	484	parallel
Strand 7	H	505	508	parallel
Strand 8	H	543	545	parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	156	160	first strand
Strand 2	K	123	129	anti-parallel
Strand 3	K	97	100	parallel
Strand 4	K	3	8	parallel
Strand 5	K	29	35	parallel
Strand 6	K	61	64	parallel
Strand 7	K	188	192	parallel
Strand 8	K	181	185	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	256	262	first strand
Strand 2	K	344	351	parallel
Strand 3	K	388	395	parallel
Strand 4	K	426	431	parallel
Strand 5	K	457	461	parallel
Strand 6	K	482	484	parallel
Strand 7	K	505	508	parallel
Strand 8	K	542	545	parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	156	160	first strand
Strand 2	L	123	129	anti-parallel
Strand 3	L	97	100	parallel
Strand 4	L	3	8	parallel
Strand 5	L	29	35	parallel
Strand 6	L	58	64	parallel
Strand 7	L	188	192	parallel
Strand 8	L	181	185	anti-parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	256	262	first strand
Strand 2	L	344	351	parallel
Strand 3	L	388	394	parallel
Strand 4	L	426	431	parallel
Strand 5	L	457	461	parallel
Strand 6	L	482	484	parallel
Strand 7	L	505	508	parallel
Strand 8	L	542	545	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9OFC

Analysis of interatomic Contacts of Structural Units in PDB entry:
9OFC