Analysis of interatomic Contacts of Structural Units in PDB entry:
9OFS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OFS entry

There are 2 chains in PDB entry 9OFS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 243LEU 451
C
 GLU 2ALA 196
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 9OFS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
252 259Right-handed alpha
Helix 2
AA2
A
311 317Right-handed alpha
Helix 3
AA3
A
355 362Right-handed alpha
Helix 4
AA4
A
391 395Right-handed 310
Helix 5
AA5
A
421 427Right-handed alpha
Helix 6
AA6
C
70 74Right-handed 310
Helix 7
AA7
C
163 167Right-handed 310
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There are 11 sheets in PDB entry 9OFS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 249first strand
Strand 2
A
263 271anti-parallel
Strand 3
A
302 309anti-parallel
Strand 4
A
290 291anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 249first strand
Strand 2
A
263 271anti-parallel
Strand 3
A
302 309anti-parallel
Strand 4
A
295 296anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 281first strand
Strand 2
A
321 326anti-parallel
Strand 3
A
334 338anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 352first strand
Strand 2
A
364 374anti-parallel
Strand 3
A
411 420anti-parallel
Strand 4
A
396 397anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 352first strand
Strand 2
A
364 374anti-parallel
Strand 3
A
411 420anti-parallel
Strand 4
A
401 402anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 389first strand
Strand 2
A
380 385anti-parallel
Strand 3
A
430 435anti-parallel
Strand 4
A
443 448anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 12first strand
Strand 2
C
24 28anti-parallel
Strand 3
C
63 66anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 19first strand
Strand 2
C
94 99parallel
Strand 3
C
75 83anti-parallel
Strand 4
C
87 90anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 54first strand
Strand 2
C
36 43anti-parallel
Strand 3
C
75 83anti-parallel
Strand 4
C
94 99anti-parallel
Strand 5
C
182 183parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
106 109first strand
Strand 2
C
122 126anti-parallel
Strand 3
C
155 158anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
114 115first strand
Strand 2
C
190 194parallel
Strand 3
C
168 175anti-parallel
Strand 4
C
134 139anti-parallel
Strand 5
C
149 150anti-parallel
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