Analysis of interatomic Contacts of Structural Units in PDB entry:
9OG2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9OG2 entry

There are 5 chains in PDB entry 9OG2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 18	ASN 364
B	GLN 1	VAL 111
C	ALA 1	LYS 107
D	GLU 1	SER 113
E	ALA 1	LYS 107

There are 23 helices in PDB entry 9OG2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	19	34	Right-handed alpha
Helix 2	AA2	A	45	63	Right-handed alpha
Helix 3	AA3	A	67	71	Right-handed 310
Helix 4	AA4	A	77	81	Right-handed 310
Helix 5	AA5	A	82	87	Right-handed alpha
Helix 6	AA6	A	89	97	Right-handed alpha
Helix 7	AA7	A	101	108	Right-handed alpha
Helix 8	AA8	A	117	131	Right-handed alpha
Helix 9	AA9	A	142	146	Right-handed 310
Helix 10	AB1	A	150	177	Right-handed alpha
Helix 11	AB2	A	186	191	Right-handed 310
Helix 12	AB3	A	194	204	Right-handed alpha
Helix 13	AB4	A	206	211	Right-handed 310
Helix 14	AB5	A	215	228	Right-handed alpha
Helix 15	AB6	A	254	262	Right-handed alpha
Helix 16	AB7	A	324	331	Right-handed 310
Helix 17	AB8	A	332	337	Right-handed alpha
Helix 18	AB9	A	341	345	Right-handed 310
Helix 19	AC1	B	83	87	Right-handed 310
Helix 20	AC2	C	79	83	Right-handed 310
Helix 21	AC3	D	28	32	Right-handed 310
Helix 22	AC4	D	83	87	Right-handed 310
Helix 23	AC5	E	79	83	Right-handed 310

There are 12 sheets in PDB entry 9OG2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	245	249	first strand
Strand 2	A	238	242	anti-parallel
Strand 3	A	268	271	anti-parallel
Strand 4	A	298	300	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	312	318	first strand
Strand 2	A	277	284	anti-parallel
Strand 3	A	288	294	anti-parallel
Strand 4	A	361	362	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	6	first strand
Strand 2	B	18	25	anti-parallel
Strand 3	B	77	82	anti-parallel
Strand 4	B	67	72	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	59	first strand
Strand 2	B	46	52	anti-parallel
Strand 3	B	33	39	anti-parallel
Strand 4	B	88	95	anti-parallel
Strand 5	B	100	102	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	59	first strand
Strand 2	B	46	52	anti-parallel
Strand 3	B	33	39	anti-parallel
Strand 4	B	88	95	anti-parallel
Strand 5	B	107	109	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	7	first strand
Strand 2	C	19	25	anti-parallel
Strand 3	C	72	75	anti-parallel
Strand 4	C	62	65	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	14	first strand
Strand 2	C	102	107	parallel
Strand 3	C	84	90	anti-parallel
Strand 4	C	33	38	anti-parallel
Strand 5	C	45	48	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	7	first strand
Strand 2	D	18	25	anti-parallel
Strand 3	D	77	82	anti-parallel
Strand 4	D	67	72	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	11	first strand
Strand 2	D	107	110	parallel
Strand 3	D	88	98	anti-parallel
Strand 4	D	34	39	anti-parallel
Strand 5	D	45	51	anti-parallel
Strand 6	D	57	59	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	11	first strand
Strand 2	D	107	110	parallel
Strand 3	D	88	98	anti-parallel
Strand 4	D	100	103	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	4	7	first strand
Strand 2	E	19	25	anti-parallel
Strand 3	E	71	75	anti-parallel
Strand 4	E	62	66	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	13	first strand
Strand 2	E	102	106	parallel
Strand 3	E	85	90	anti-parallel
Strand 4	E	33	38	anti-parallel
Strand 5	E	45	50	anti-parallel
Strand 6	E	53	54	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9OG2

Analysis of interatomic Contacts of Structural Units in PDB entry:
9OG2