Analysis of interatomic Contacts of Structural Units in PDB entry:
9OGX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OGX entry

There is 1 chain in PDB entry 9OGX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 174TRP 1456
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9OGX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
231 236Right-handed alpha
Helix 2
AA2
A
241 245Right-handed 310
Helix 3
AA3
A
282 284Right-handed 310
Helix 4
AA4
A
288 302Right-handed alpha
Helix 5
AA5
A
315 336Right-handed alpha
Helix 6
AA6
A
340 353Right-handed alpha
Helix 7
AA7
A
354 362Right-handed 310
Helix 8
AA8
A
383 390Right-handed 310
Helix 9
AA9
A
430 451Right-handed alpha
Helix 10
AB1
A
473 486Right-handed alpha
Helix 11
AB2
A
491 498Right-handed alpha
Helix 12
AB3
A
508 516Right-handed alpha
Helix 13
AB4
A
524 535Right-handed alpha
Helix 14
AB5
A
539 543Right-handed 310
Helix 15
AB6
A
553 558Right-handed alpha
Helix 16
AB7
A
587 599Right-handed alpha
Helix 17
AB8
A
609 625Right-handed alpha
Helix 18
AB9
A
635 646Right-handed alpha
Helix 19
AC1
A
656 658Right-handed 310
Helix 20
AC2
A
672 686Right-handed alpha
Helix 21
AC3
A
732 736Right-handed 310
Helix 22
AC4
A
761 765Right-handed 310
Helix 23
AC5
A
853 859Right-handed alpha
Helix 24
AC6
A
874 877Right-handed 310
Helix 25
AC7
A
878 886Right-handed alpha
Helix 26
AC8
A
886 894Right-handed alpha
Helix 27
AC9
A
912 917Right-handed alpha
Helix 28
AD1
A
939 952Right-handed alpha
Helix 29
AD2
A
1007 1013Right-handed alpha
Helix 30
AD3
A
1016 1024Right-handed alpha
Helix 31
AD4
A
1026 1030Right-handed 310
Helix 32
AD5
A
1049 1053Right-handed 310
Helix 33
AD6
A
1079 1083Right-handed 310
Helix 34
AD7
A
1086 1090Right-handed 310
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There are 16 sheets in PDB entry 9OGX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 177first strand
Strand 2
A
181 182anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 204first strand
Strand 2
A
194 198anti-parallel
Strand 3
A
1160 1163parallel
Strand 4
A
1169 1172anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 226first strand
Strand 2
A
1095 1100anti-parallel
Strand 3
A
1105 1108anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 258first strand
Strand 2
A
279 280anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 264first strand
Strand 2
A
270 272anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
993 1002first strand
Strand 2
A
971 980anti-parallel
Strand 3
A
377 381anti-parallel
Strand 4
A
1055 1057anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
501 502first strand
Strand 2
A
461 464parallel
Strand 3
A
956 961parallel
Strand 4
A
897 899parallel
Strand 5
A
861 863parallel
Strand 6
A
652 654parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
691 697first strand
Strand 2
A
711 717anti-parallel
Strand 3
A
739 743anti-parallel
Strand 4
A
818 826anti-parallel
Strand 5
A
769 775anti-parallel
Strand 6
A
780 782anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
691 697first strand
Strand 2
A
711 717anti-parallel
Strand 3
A
739 743anti-parallel
Strand 4
A
818 826anti-parallel
Strand 5
A
812 813anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
756 759first strand
Strand 2
A
801 804anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1118 1121first strand
Strand 2
A
1127 1130anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1139 1141first strand
Strand 2
A
1148 1150anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1182 1186first strand
Strand 2
A
1191 1195anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1204 1208first strand
Strand 2
A
1211 1215anti-parallel
Strand 3
A
1221 1222anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1270 1273first strand
Strand 2
A
1276 1279anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1355 1356first strand
Strand 2
A
1364 1365anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il