Analysis of interatomic Contacts of Structural Units in PDB entry:
9OH4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9OH4 entry

There are 8 chains in PDB entry 9OH4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 149	ASP 505
B	LYS 149	ASP 505
C	LYS 149	ASP 505
D	LYS 149	ASP 505
E	C 1	G 41
F	C 1	G 41
G	C 1	G 41
H	C 1	G 41

There are 56 helices in PDB entry 9OH4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	150	157	Right-handed alpha
Helix 2	AA2	A	160	185	Right-handed alpha
Helix 3	AA3	A	246	252	Right-handed 310
Helix 4	AA4	A	259	275	Right-handed alpha
Helix 5	AA5	A	333	341	Right-handed alpha
Helix 6	AA6	A	367	377	Right-handed alpha
Helix 7	AA7	A	393	412	Right-handed alpha
Helix 8	AA8	A	419	433	Right-handed alpha
Helix 9	AA9	A	436	443	Right-handed 310
Helix 10	AB1	A	444	463	Right-handed alpha
Helix 11	AB2	A	482	498	Right-handed alpha
Helix 12	AB3	B	150	158	Right-handed alpha
Helix 13	AB4	B	160	184	Right-handed alpha
Helix 14	AB5	B	197	202	Right-handed alpha
Helix 15	AB6	B	246	252	Right-handed 310
Helix 16	AB7	B	259	277	Right-handed alpha
Helix 17	AB8	B	319	323	Right-handed 310
Helix 18	AB9	B	334	341	Right-handed alpha
Helix 19	AC1	B	358	361	Right-handed 310
Helix 20	AC2	B	367	377	Right-handed alpha
Helix 21	AC3	B	393	412	Right-handed alpha
Helix 22	AC4	B	419	434	Right-handed alpha
Helix 23	AC5	B	441	443	Right-handed 310
Helix 24	AC6	B	444	463	Right-handed alpha
Helix 25	AC7	B	482	500	Right-handed alpha
Helix 26	AC8	B	501	505	Right-handed 310
Helix 27	AC9	C	150	157	Right-handed alpha
Helix 28	AD1	C	160	185	Right-handed alpha
Helix 29	AD2	C	246	251	Right-handed 310
Helix 30	AD3	C	258	275	Right-handed alpha
Helix 31	AD4	C	319	323	Right-handed 310
Helix 32	AD5	C	333	341	Right-handed alpha
Helix 33	AD6	C	358	362	Right-handed 310
Helix 34	AD7	C	367	377	Right-handed alpha
Helix 35	AD8	C	393	412	Right-handed alpha
Helix 36	AD9	C	419	434	Right-handed alpha
Helix 37	AE1	C	436	443	Right-handed 310
Helix 38	AE2	C	444	462	Right-handed alpha
Helix 39	AE3	C	482	499	Right-handed alpha
Helix 40	AE4	C	500	505	Right-handed 310
Helix 41	AE5	D	150	158	Right-handed alpha
Helix 42	AE6	D	160	185	Right-handed alpha
Helix 43	AE7	D	199	203	Right-handed 310
Helix 44	AE8	D	246	252	Right-handed 310
Helix 45	AE9	D	258	277	Right-handed alpha
Helix 46	AF1	D	319	323	Right-handed 310
Helix 47	AF2	D	332	341	Right-handed alpha
Helix 48	AF3	D	358	361	Right-handed 310
Helix 49	AF4	D	367	377	Right-handed alpha
Helix 50	AF5	D	393	412	Right-handed alpha
Helix 51	AF6	D	413	418	Right-handed 310
Helix 52	AF7	D	419	434	Right-handed alpha
Helix 53	AF8	D	441	443	Right-handed 310
Helix 54	AF9	D	444	463	Right-handed alpha
Helix 55	AG1	D	482	499	Right-handed alpha
Helix 56	AG2	D	501	505	Right-handed 310

There are 6 sheets in PDB entry 9OH4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	227	first strand
Strand 2	A	235	239	anti-parallel
Strand 3	A	362	365	anti-parallel
Strand 4	A	345	349	anti-parallel
Strand 5	A	312	314	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	193	196	first strand
Strand 2	B	214	219	anti-parallel
Strand 3	B	309	314	parallel
Strand 4	B	345	349	anti-parallel
Strand 5	B	363	366	anti-parallel
Strand 6	B	234	239	anti-parallel
Strand 7	B	223	227	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	211	215	first strand
Strand 2	C	305	309	parallel
Strand 3	C	294	295	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	223	227	first strand
Strand 2	C	234	239	anti-parallel
Strand 3	C	363	366	anti-parallel
Strand 4	C	346	348	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	193	196	first strand
Strand 2	D	214	219	anti-parallel
Strand 3	D	308	314	parallel
Strand 4	D	345	349	anti-parallel
Strand 5	D	363	366	anti-parallel
Strand 6	D	234	239	anti-parallel
Strand 7	D	223	227	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	282	284	first strand
Strand 2	D	296	298	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9OH4

Analysis of interatomic Contacts of Structural Units in PDB entry:
9OH4