Analysis of interatomic Contacts of Structural Units in PDB entry:
9OK3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OK3 entry

There are 6 chains in PDB entry 9OK3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 THR 197SER 259
A
 SER 188SER 259
C
 MET 1GLY 204
F
 GLY 0THR 286
G
 GLY 0GLN 288
H
 GLY 0THR 286
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 9OK3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
197 259Right-handed alpha
Helix 2
AA2
A
189 199Right-handed alpha
Helix 3
AA3
A
201 259Right-handed alpha
Helix 4
AA4
C
2 82Right-handed alpha
Helix 5
AA5
C
140 202Right-handed alpha
Helix 6
AA6
F
1 32Right-handed alpha
Helix 7
AA7
F
35 55Right-handed alpha
Helix 8
AA8
F
57 75Right-handed alpha
Helix 9
AA9
F
77 93Right-handed alpha
Helix 10
AB1
F
98 114Right-handed alpha
Helix 11
AB2
F
116 135Right-handed alpha
Helix 12
AB3
F
137 155Right-handed alpha
Helix 13
AB4
F
160 173Right-handed alpha
Helix 14
AB5
F
174 176Right-handed 310
Helix 15
AB6
F
177 194Right-handed alpha
Helix 16
AB7
F
198 215Right-handed alpha
Helix 17
AB8
F
218 232Right-handed alpha
Helix 18
AB9
F
233 237Right-handed 310
Helix 19
AC1
F
238 252Right-handed alpha
Helix 20
AC2
F
255 270Right-handed alpha
Helix 21
AC3
F
273 285Right-handed alpha
Helix 22
AC4
G
1 23Right-handed alpha
Helix 23
AC5
G
39 56Right-handed alpha
Helix 24
AC6
G
60 75Right-handed alpha
Helix 25
AC7
G
78 96Right-handed alpha
Helix 26
AC8
G
96 115Right-handed alpha
Helix 27
AC9
G
116 134Right-handed alpha
Helix 28
AD1
G
138 155Right-handed alpha
Helix 29
AD2
G
157 176Right-handed alpha
Helix 30
AD3
G
178 195Right-handed alpha
Helix 31
AD4
G
197 200Right-handed 310
Helix 32
AD5
G
201 217Right-handed alpha
Helix 33
AD6
G
217 232Right-handed alpha
Helix 34
AD7
G
233 237Right-handed 310
Helix 35
AD8
G
238 252Right-handed alpha
Helix 36
AD9
G
255 270Right-handed alpha
Helix 37
AE1
G
274 286Right-handed alpha
Helix 38
AE2
H
1 23Right-handed alpha
Helix 39
AE3
H
37 56Right-handed alpha
Helix 40
AE4
H
57 75Right-handed alpha
Helix 41
AE5
H
78 93Right-handed alpha
Helix 42
AE6
H
96 114Right-handed alpha
Helix 43
AE7
H
116 134Right-handed alpha
Helix 44
AE8
H
137 155Right-handed alpha
Helix 45
AE9
H
157 176Right-handed alpha
Helix 46
AF1
H
177 195Right-handed alpha
Helix 47
AF2
H
198 200Right-handed 310
Helix 48
AF3
H
201 217Right-handed alpha
Helix 49
AF4
H
218 232Right-handed alpha
Helix 50
AF5
H
233 237Right-handed 310
Helix 51
AF6
H
238 252Right-handed alpha
Helix 52
AF7
H
256 270Right-handed alpha
Helix 53
AF8
H
273 286Right-handed alpha
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There are no sheets in PDB entry 9OK3
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il