Analysis of interatomic Contacts of Structural Units in PDB entry:
9OK8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OK8 entry

There is 1 chain in PDB entry 9OK8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 118ALA 877
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 9OK8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
118 130Right-handed alpha
Helix 2
AA2
A
180 186Right-handed alpha
Helix 3
AA3
A
209 213Right-handed 310
Helix 4
AA4
A
248 254Right-handed alpha
Helix 5
AA5
A
305 311Right-handed alpha
Helix 6
AA6
A
352 362Right-handed alpha
Helix 7
AA7
A
365 377Right-handed alpha
Helix 8
AA8
A
378 383Right-handed alpha
Helix 9
AA9
A
387 404Right-handed alpha
Helix 10
AB1
A
414 430Right-handed alpha
Helix 11
AB2
A
438 454Right-handed alpha
Helix 12
AB3
A
461 467Right-handed alpha
Helix 13
AB4
A
473 480Right-handed alpha
Helix 14
AB5
A
499 511Right-handed alpha
Helix 15
AB6
A
512 516Right-handed 310
Helix 16
AB7
A
524 535Right-handed alpha
Helix 17
AB8
A
546 550Right-handed 310
Helix 18
AB9
A
556 563Right-handed alpha
Helix 19
AC1
A
571 580Right-handed alpha
Helix 20
AC2
A
616 627Right-handed alpha
Helix 21
AC3
A
630 639Right-handed alpha
Helix 22
AC4
A
654 665Right-handed alpha
Helix 23
AC5
A
744 753Right-handed alpha
Helix 24
AC6
A
772 781Right-handed alpha
Helix 25
AC7
A
799 809Right-handed alpha
Helix 26
AC8
A
825 839Right-handed alpha
Helix 27
AC9
A
859 868Right-handed alpha
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There are 2 sheets in PDB entry 9OK8. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
671 674first strand
Strand 2
A
732 735parallel
Strand 3
A
760 763parallel
Strand 4
A
789 790parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
845 846first strand
Strand 2
A
872 873parallel
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