Analysis of interatomic Contacts of Structural Units in PDB entry:
9OKF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OKF entry

There is 1 chain in PDB entry 9OKF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 139GLN 742
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 9OKF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
139 160Right-handed alpha
Helix 2
AA2
A
162 198Right-handed alpha
Helix 3
AA3
A
200 230Right-handed alpha
Helix 4
AA4
A
230 252Right-handed alpha
Helix 5
AA5
A
254 270Right-handed alpha
Helix 6
AA6
A
271 282Right-handed alpha
Helix 7
AA7
A
288 295Right-handed alpha
Helix 8
AA8
A
297 315Right-handed alpha
Helix 9
AA9
A
317 321Right-handed 310
Helix 10
AB1
A
331 340Right-handed alpha
Helix 11
AB2
A
341 352Right-handed alpha
Helix 12
AB3
A
357 364Right-handed alpha
Helix 13
AB4
A
366 385Right-handed alpha
Helix 14
AB5
A
416 438Right-handed alpha
Helix 15
AB6
A
443 481Right-handed alpha
Helix 16
AB7
A
596 607Right-handed alpha
Helix 17
AB8
A
608 623Right-handed alpha
Helix 18
AB9
A
623 641Right-handed alpha
Helix 19
AC1
A
642 645Right-handed 310
Helix 20
AC2
A
647 676Right-handed alpha
Helix 21
AC3
A
681 708Right-handed alpha
Helix 22
AC4
A
713 731Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9OKF.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 323first strand
Strand 2
A
329 330anti-parallel
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