Analysis of interatomic Contacts of Structural Units in PDB entry:
9OKJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OKJ entry

There is 1 chain in PDB entry 9OKJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 139GLN 742
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 9OKJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
140 160Right-handed alpha
Helix 2
AA2
A
162 188Right-handed alpha
Helix 3
AA3
A
189 194Right-handed alpha
Helix 4
AA4
A
200 204Right-handed 310
Helix 5
AA5
A
205 226Right-handed alpha
Helix 6
AA6
A
230 250Right-handed alpha
Helix 7
AA7
A
254 270Right-handed alpha
Helix 8
AA8
A
271 282Right-handed alpha
Helix 9
AA9
A
288 295Right-handed alpha
Helix 10
AB1
A
297 315Right-handed alpha
Helix 11
AB2
A
316 319Right-handed 310
Helix 12
AB3
A
332 341Right-handed alpha
Helix 13
AB4
A
341 352Right-handed alpha
Helix 14
AB5
A
357 364Right-handed alpha
Helix 15
AB6
A
366 385Right-handed alpha
Helix 16
AB7
A
416 438Right-handed alpha
Helix 17
AB8
A
443 481Right-handed alpha
Helix 18
AB9
A
594 623Right-handed alpha
Helix 19
AC1
A
623 642Right-handed alpha
Helix 20
AC2
A
643 645Right-handed 310
Helix 21
AC3
A
647 677Right-handed alpha
Helix 22
AC4
A
681 707Right-handed alpha
Helix 23
AC5
A
712 731Right-handed alpha
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There are no sheets in PDB entry 9OKJ
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