Analysis of interatomic Contacts of Structural Units in PDB entry:
9OM7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9OM7 entry

There are 6 chains in PDB entry 9OM7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	ARG 107	PRO 368
E	ARG 107	PRO 368
B	ARG 107	PRO 368
D	ARG 107	PRO 368
A	ARG 107	PRO 368
C	ASN 106	PRO 368

There are 53 helices in PDB entry 9OM7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	124	129	Right-handed alpha
Helix 2	AA2	F	142	153	Right-handed alpha
Helix 3	AA3	F	154	157	Right-handed 310
Helix 4	AA4	F	158	177	Right-handed alpha
Helix 5	AA5	F	189	200	Right-handed alpha
Helix 6	AA6	F	236	243	Right-handed alpha
Helix 7	AA7	F	261	267	Right-handed 310
Helix 8	AA8	F	286	308	Right-handed alpha
Helix 9	AA9	F	322	332	Right-handed alpha
Helix 10	AB1	E	142	153	Right-handed alpha
Helix 11	AB2	E	154	157	Right-handed 310
Helix 12	AB3	E	158	177	Right-handed alpha
Helix 13	AB4	E	189	200	Right-handed alpha
Helix 14	AB5	E	239	243	Right-handed 310
Helix 15	AB6	E	261	265	Right-handed 310
Helix 16	AB7	E	286	308	Right-handed alpha
Helix 17	AB8	E	322	329	Right-handed alpha
Helix 18	AB9	E	330	332	Right-handed 310
Helix 19	AC1	B	142	153	Right-handed alpha
Helix 20	AC2	B	154	157	Right-handed 310
Helix 21	AC3	B	158	177	Right-handed alpha
Helix 22	AC4	B	189	200	Right-handed alpha
Helix 23	AC5	B	237	242	Right-handed alpha
Helix 24	AC6	B	261	266	Right-handed 310
Helix 25	AC7	B	286	308	Right-handed alpha
Helix 26	AC8	B	322	329	Right-handed alpha
Helix 27	AC9	B	330	332	Right-handed 310
Helix 28	AD1	D	144	153	Right-handed alpha
Helix 29	AD2	D	154	157	Right-handed 310
Helix 30	AD3	D	158	177	Right-handed alpha
Helix 31	AD4	D	189	200	Right-handed alpha
Helix 32	AD5	D	236	241	Right-handed 310
Helix 33	AD6	D	261	265	Right-handed 310
Helix 34	AD7	D	286	308	Right-handed alpha
Helix 35	AD8	D	322	331	Right-handed alpha
Helix 36	AD9	A	142	153	Right-handed alpha
Helix 37	AE1	A	158	177	Right-handed alpha
Helix 38	AE2	A	189	200	Right-handed alpha
Helix 39	AE3	A	236	240	Right-handed 310
Helix 40	AE4	A	261	265	Right-handed 310
Helix 41	AE5	A	286	308	Right-handed alpha
Helix 42	AE6	A	322	329	Right-handed alpha
Helix 43	AE7	A	330	332	Right-handed 310
Helix 44	AE8	A	357	361	Right-handed 310
Helix 45	AE9	C	131	133	Right-handed 310
Helix 46	AF1	C	142	153	Right-handed alpha
Helix 47	AF2	C	154	157	Right-handed 310
Helix 48	AF3	C	158	177	Right-handed alpha
Helix 49	AF4	C	189	200	Right-handed alpha
Helix 50	AF5	C	237	243	Right-handed alpha
Helix 51	AF6	C	286	308	Right-handed alpha
Helix 52	AF7	C	322	329	Right-handed alpha
Helix 53	AF8	C	330	332	Right-handed 310

There are 16 sheets in PDB entry 9OM7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	136	141	first strand
Strand 2	F	108	114	parallel
Strand 3	F	181	187	parallel
Strand 4	F	207	211	parallel
Strand 5	F	218	220	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	232	233	first strand
Strand 2	F	273	275	anti-parallel
Strand 3	F	251	253	parallel
Strand 4	F	313	319	parallel
Strand 5	F	247	248	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	232	233	first strand
Strand 2	F	273	275	anti-parallel
Strand 3	F	251	253	parallel
Strand 4	F	313	319	parallel
Strand 5	F	339	346	parallel
Strand 6	F	349	355	anti-parallel
Strand 7	F	364	366	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	136	141	first strand
Strand 2	E	108	114	parallel
Strand 3	E	181	187	parallel
Strand 4	E	207	211	parallel
Strand 5	E	218	220	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	232	233	first strand
Strand 2	E	271	275	anti-parallel
Strand 3	E	247	253	parallel
Strand 4	E	313	319	parallel
Strand 5	E	339	346	parallel
Strand 6	E	349	355	anti-parallel
Strand 7	E	364	366	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	138	141	first strand
Strand 2	B	110	114	parallel
Strand 3	B	183	187	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	209	211	first strand
Strand 2	B	218	220	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	232	233	first strand
Strand 2	B	271	275	anti-parallel
Strand 3	B	247	253	parallel
Strand 4	B	313	317	parallel
Strand 5	B	339	346	parallel
Strand 6	B	349	355	anti-parallel
Strand 7	B	364	366	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	136	141	first strand
Strand 2	D	108	114	parallel
Strand 3	D	181	186	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	209	211	first strand
Strand 2	D	218	220	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	232	233	first strand
Strand 2	D	271	275	anti-parallel
Strand 3	D	247	253	parallel
Strand 4	D	313	319	parallel
Strand 5	D	339	346	parallel
Strand 6	D	349	355	anti-parallel
Strand 7	D	364	366	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	141	first strand
Strand 2	A	108	114	parallel
Strand 3	A	181	187	parallel
Strand 4	A	207	211	parallel
Strand 5	A	218	220	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	231	233	first strand
Strand 2	A	271	276	anti-parallel
Strand 3	A	247	253	parallel
Strand 4	A	313	319	parallel
Strand 5	A	339	346	parallel
Strand 6	A	349	355	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	141	first strand
Strand 2	C	108	114	parallel
Strand 3	C	186	187	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	141	first strand
Strand 2	C	108	114	parallel
Strand 3	C	182	184	parallel
Strand 4	C	207	212	parallel
Strand 5	C	217	220	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	232	233	first strand
Strand 2	C	271	275	anti-parallel
Strand 3	C	247	253	parallel
Strand 4	C	313	319	parallel
Strand 5	C	339	346	parallel
Strand 6	C	349	355	anti-parallel
Strand 7	C	364	366	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9OM7

Analysis of interatomic Contacts of Structural Units in PDB entry:
9OM7