Analysis of interatomic Contacts of Structural Units in PDB entry:
9OME


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OME entry

There are 18 chains in PDB entry 9OME (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 25SER 94
B
 SER 25SER 94
C
 SER 25SER 94
D
 SER 25SER 94
E
 SER 25SER 94
F
 SER 25SER 94
G
 SER 25SER 94
H
 SER 25SER 94
I
 SER 25SER 94
J
 SER 25SER 94
K
 SER 25SER 94
L
 SER 25SER 94
M
 SER 25SER 94
N
 SER 25SER 94
O
 SER 25SER 94
P
 SER 25SER 94
Q
 SER 25SER 94
R
 SER 25SER 94
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 9OME. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 64Right-handed alpha
Helix 2
AA2
B
40 64Right-handed alpha
Helix 3
AA3
C
40 64Right-handed alpha
Helix 4
AA4
D
40 64Right-handed alpha
Helix 5
AA5
E
40 64Right-handed alpha
Helix 6
AA6
F
41 64Right-handed alpha
Helix 7
AA7
G
43 64Right-handed alpha
Helix 8
AA8
H
40 64Right-handed alpha
Helix 9
AA9
I
40 63Right-handed alpha
Helix 10
AB1
J
40 64Right-handed alpha
Helix 11
AB2
K
41 64Right-handed alpha
Helix 12
AB3
L
40 64Right-handed alpha
Helix 13
AB4
M
40 64Right-handed alpha
Helix 14
AB5
N
40 64Right-handed alpha
Helix 15
AB6
O
41 64Right-handed alpha
Helix 16
AB7
P
40 64Right-handed alpha
Helix 17
AB8
Q
40 64Right-handed alpha
Helix 18
AB9
R
40 64Right-handed alpha
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There are 2 sheets in PDB entry 9OME. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 28 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 36first strand
Strand 2
A
83 92anti-parallel
Strand 3
A
71 75anti-parallel
Strand 4
P
27 36parallel
Strand 5
P
83 92anti-parallel
Strand 6
P
71 76anti-parallel
Strand 7
O
27 36parallel
Strand 8
O
83 92anti-parallel
Strand 9
O
68 76anti-parallel
Strand 10
N
27 36parallel
Strand 11
N
83 92anti-parallel
Strand 12
N
68 76anti-parallel
Strand 13
E
27 36parallel
Strand 14
E
83 92anti-parallel
Strand 15
E
68 76anti-parallel
Strand 16
L
28 36parallel
Strand 17
L
83 91anti-parallel
Strand 18
L
71 76anti-parallel
Strand 19
J
27 36parallel
Strand 20
J
83 92anti-parallel
Strand 21
J
68 76anti-parallel
Strand 22
Q
27 36parallel
Strand 23
Q
83 92anti-parallel
Strand 24
Q
68 76anti-parallel
Strand 25
B
27 36parallel
Strand 26
B
83 92anti-parallel
Strand 27
B
68 76anti-parallel
Strand 28
A
27 36parallel
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There are 28 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 36first strand
Strand 2
C
83 92anti-parallel
Strand 3
C
71 76anti-parallel
Strand 4
I
27 36parallel
Strand 5
I
83 92anti-parallel
Strand 6
I
68 76anti-parallel
Strand 7
M
27 36parallel
Strand 8
M
83 92anti-parallel
Strand 9
M
68 76anti-parallel
Strand 10
K
27 36parallel
Strand 11
K
83 92anti-parallel
Strand 12
K
71 76anti-parallel
Strand 13
H
27 36parallel
Strand 14
H
83 92anti-parallel
Strand 15
H
71 76anti-parallel
Strand 16
G
27 36parallel
Strand 17
G
83 92anti-parallel
Strand 18
G
71 76anti-parallel
Strand 19
F
27 36parallel
Strand 20
F
83 92anti-parallel
Strand 21
F
71 76anti-parallel
Strand 22
R
27 36parallel
Strand 23
R
83 92anti-parallel
Strand 24
R
68 76anti-parallel
Strand 25
D
27 36parallel
Strand 26
D
83 92anti-parallel
Strand 27
D
68 76anti-parallel
Strand 28
C
27 36parallel
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