Analysis of interatomic Contacts of Structural Units in PDB entry:
9OMQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9OMQ entry

There are 6 chains in PDB entry 9OMQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 207	PRO 740
B	MET 1	PRO 740
C	MET 1	PRO 740
D	ILE 209	PRO 740
E	ASN 210	PRO 740
F	PHE 215	PRO 740

There are170 helices in PDB entry 9OMQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	214	219	Right-handed alpha
Helix 2	AA2	A	224	235	Right-handed alpha
Helix 3	AA3	A	241	249	Right-handed alpha
Helix 4	AA4	A	265	277	Right-handed alpha
Helix 5	AA5	A	286	291	Right-handed alpha
Helix 6	AA6	A	296	316	Right-handed alpha
Helix 7	AA7	A	330	334	Right-handed 310
Helix 8	AA8	A	348	359	Right-handed alpha
Helix 9	AA9	A	399	418	Right-handed alpha
Helix 10	AB1	A	425	433	Right-handed alpha
Helix 11	AB2	A	437	462	Right-handed alpha
Helix 12	AB3	A	466	473	Right-handed alpha
Helix 13	AB4	A	478	487	Right-handed alpha
Helix 14	AB5	A	511	528	Right-handed alpha
Helix 15	AB6	A	548	561	Right-handed alpha
Helix 16	AB7	A	569	573	Right-handed 310
Helix 17	AB8	A	577	594	Right-handed alpha
Helix 18	AB9	A	604	609	Right-handed alpha
Helix 19	AC1	A	619	630	Right-handed alpha
Helix 20	AC2	A	648	655	Right-handed alpha
Helix 21	AC3	A	656	660	Right-handed 310
Helix 22	AC4	A	672	684	Right-handed alpha
Helix 23	AC5	A	687	698	Right-handed alpha
Helix 24	AC6	A	706	718	Right-handed alpha
Helix 25	AC7	A	725	736	Right-handed alpha
Helix 26	AC8	B	13	20	Right-handed alpha
Helix 27	AC9	B	63	71	Right-handed alpha
Helix 28	AD1	B	86	91	Right-handed alpha
Helix 29	AD2	B	103	107	Right-handed 310
Helix 30	AD3	B	114	126	Right-handed alpha
Helix 31	AD4	B	224	234	Right-handed alpha
Helix 32	AD5	B	241	249	Right-handed alpha
Helix 33	AD6	B	267	277	Right-handed alpha
Helix 34	AD7	B	297	306	Right-handed alpha
Helix 35	AD8	B	306	317	Right-handed alpha
Helix 36	AD9	B	329	334	Right-handed alpha
Helix 37	AE1	B	348	359	Right-handed alpha
Helix 38	AE2	B	399	411	Right-handed alpha
Helix 39	AE3	B	412	417	Right-handed alpha
Helix 40	AE4	B	425	433	Right-handed alpha
Helix 41	AE5	B	438	456	Right-handed alpha
Helix 42	AE6	B	476	484	Right-handed alpha
Helix 43	AE7	B	498	503	Right-handed alpha
Helix 44	AE8	B	511	526	Right-handed alpha
Helix 45	AE9	B	549	560	Right-handed alpha
Helix 46	AF1	B	577	593	Right-handed alpha
Helix 47	AF2	B	604	609	Right-handed alpha
Helix 48	AF3	B	619	630	Right-handed alpha
Helix 49	AF4	B	648	655	Right-handed alpha
Helix 50	AF5	B	672	684	Right-handed alpha
Helix 51	AF6	B	687	699	Right-handed alpha
Helix 52	AF7	B	706	718	Right-handed alpha
Helix 53	AF8	B	719	720	Right-handed 310
Helix 54	AF9	B	721	723	Right-handed 310
Helix 55	AG1	B	724	737	Right-handed alpha
Helix 56	AG2	C	13	19	Right-handed alpha
Helix 57	AG3	C	63	71	Right-handed alpha
Helix 58	AG4	C	114	126	Right-handed alpha
Helix 59	AG5	C	214	219	Right-handed alpha
Helix 60	AG6	C	224	234	Right-handed alpha
Helix 61	AG7	C	241	249	Right-handed alpha
Helix 62	AG8	C	266	277	Right-handed alpha
Helix 63	AG9	C	287	291	Right-handed 310
Helix 64	AH1	C	297	304	Right-handed alpha
Helix 65	AH2	C	306	317	Right-handed alpha
Helix 66	AH3	C	336	340	Right-handed 310
Helix 67	AH4	C	349	359	Right-handed alpha
Helix 68	AH5	C	380	384	Right-handed 310
Helix 69	AH6	C	399	411	Right-handed alpha
Helix 70	AH7	C	412	417	Right-handed alpha
Helix 71	AH8	C	427	431	Right-handed 310
Helix 72	AH9	C	437	454	Right-handed alpha
Helix 73	AI1	C	476	487	Right-handed alpha
Helix 74	AI2	C	497	501	Right-handed 310
Helix 75	AI3	C	511	528	Right-handed alpha
Helix 76	AI4	C	553	561	Right-handed alpha
Helix 77	AI5	C	569	573	Right-handed 310
Helix 78	AI6	C	577	592	Right-handed alpha
Helix 79	AI7	C	593	595	Right-handed 310
Helix 80	AI8	C	604	609	Right-handed alpha
Helix 81	AI9	C	622	630	Right-handed alpha
Helix 82	AJ1	C	648	655	Right-handed alpha
Helix 83	AJ2	C	672	684	Right-handed alpha
Helix 84	AJ3	C	687	699	Right-handed alpha
Helix 85	AJ4	C	706	718	Right-handed alpha
Helix 86	AJ5	C	724	737	Right-handed alpha
Helix 87	AJ6	D	224	234	Right-handed alpha
Helix 88	AJ7	D	241	249	Right-handed alpha
Helix 89	AJ8	D	265	277	Right-handed alpha
Helix 90	AJ9	D	286	291	Right-handed alpha
Helix 91	AK1	D	297	306	Right-handed alpha
Helix 92	AK2	D	306	317	Right-handed alpha
Helix 93	AK3	D	347	360	Right-handed alpha
Helix 94	AK4	D	380	384	Right-handed 310
Helix 95	AK5	D	399	410	Right-handed alpha
Helix 96	AK6	D	412	417	Right-handed alpha
Helix 97	AK7	D	425	433	Right-handed alpha
Helix 98	AK8	D	437	454	Right-handed alpha
Helix 99	AK9	D	455	457	Right-handed 310
Helix 100	AL1	D	466	470	Right-handed 310
Helix 101	AL2	D	476	487	Right-handed alpha
Helix 102	AL3	D	497	501	Right-handed 310
Helix 103	AL4	D	512	530	Right-handed alpha
Helix 104	AL5	D	549	559	Right-handed alpha
Helix 105	AL6	D	569	573	Right-handed 310
Helix 106	AL7	D	577	591	Right-handed alpha
Helix 107	AL8	D	605	608	Right-handed 310
Helix 108	AL9	D	619	632	Right-handed alpha
Helix 109	AM1	D	648	656	Right-handed alpha
Helix 110	AM2	D	657	661	Right-handed 310
Helix 111	AM3	D	672	684	Right-handed alpha
Helix 112	AM4	D	687	699	Right-handed alpha
Helix 113	AM5	D	706	719	Right-handed alpha
Helix 114	AM6	D	720	725	Right-handed 310
Helix 115	AM7	D	726	736	Right-handed alpha
Helix 116	AM8	E	225	235	Right-handed alpha
Helix 117	AM9	E	236	238	Right-handed 310
Helix 118	AN1	E	241	249	Right-handed alpha
Helix 119	AN2	E	266	275	Right-handed alpha
Helix 120	AN3	E	286	290	Right-handed 310
Helix 121	AN4	E	296	306	Right-handed alpha
Helix 122	AN5	E	306	316	Right-handed alpha
Helix 123	AN6	E	329	334	Right-handed alpha
Helix 124	AN7	E	348	359	Right-handed alpha
Helix 125	AN8	E	375	379	Right-handed 310
Helix 126	AN9	E	399	411	Right-handed alpha
Helix 127	AO1	E	412	417	Right-handed alpha
Helix 128	AO2	E	425	433	Right-handed alpha
Helix 129	AO3	E	437	458	Right-handed alpha
Helix 130	AO4	E	476	487	Right-handed alpha
Helix 131	AO5	E	495	501	Right-handed 310
Helix 132	AO6	E	511	530	Right-handed alpha
Helix 133	AO7	E	548	559	Right-handed alpha
Helix 134	AO8	E	569	573	Right-handed 310
Helix 135	AO9	E	579	591	Right-handed alpha
Helix 136	AP1	E	604	610	Right-handed alpha
Helix 137	AP2	E	620	630	Right-handed alpha
Helix 138	AP3	E	648	654	Right-handed alpha
Helix 139	AP4	E	655	660	Right-handed 310
Helix 140	AP5	E	672	684	Right-handed alpha
Helix 141	AP6	E	687	699	Right-handed alpha
Helix 142	AP7	E	707	718	Right-handed alpha
Helix 143	AP8	E	724	738	Right-handed alpha
Helix 144	AP9	F	225	234	Right-handed alpha
Helix 145	AQ1	F	235	238	Right-handed 310
Helix 146	AQ2	F	267	277	Right-handed alpha
Helix 147	AQ3	F	298	306	Right-handed alpha
Helix 148	AQ4	F	306	317	Right-handed alpha
Helix 149	AQ5	F	329	334	Right-handed alpha
Helix 150	AQ6	F	347	359	Right-handed alpha
Helix 151	AQ7	F	375	379	Right-handed 310
Helix 152	AQ8	F	381	385	Right-handed 310
Helix 153	AQ9	F	399	410	Right-handed alpha
Helix 154	AR1	F	411	417	Right-handed alpha
Helix 155	AR2	F	425	432	Right-handed alpha
Helix 156	AR3	F	437	457	Right-handed alpha
Helix 157	AR4	F	476	487	Right-handed alpha
Helix 158	AR5	F	511	528	Right-handed alpha
Helix 159	AR6	F	551	560	Right-handed alpha
Helix 160	AR7	F	577	593	Right-handed alpha
Helix 161	AR8	F	605	610	Right-handed alpha
Helix 162	AR9	F	619	630	Right-handed alpha
Helix 163	AS1	F	648	655	Right-handed alpha
Helix 164	AS2	F	656	661	Right-handed 310
Helix 165	AS3	F	673	684	Right-handed alpha
Helix 166	AS4	F	687	699	Right-handed alpha
Helix 167	AS5	F	707	718	Right-handed alpha
Helix 168	AS6	F	719	720	Right-handed 310
Helix 169	AS7	F	721	725	Right-handed 310
Helix 170	AS8	F	726	735	Right-handed alpha

There are 23 sheets in PDB entry 9OMQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	283	285	first strand
Strand 2	A	323	328	parallel
Strand 3	A	367	373	parallel
Strand 4	A	255	259	parallel
Strand 5	A	392	394	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	565	568	first strand
Strand 2	A	599	603	parallel
Strand 3	A	640	646	parallel
Strand 4	A	536	542	parallel
Strand 5	A	664	666	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	10	first strand
Strand 2	B	59	62	parallel
Strand 3	B	22	24	anti-parallel
Strand 4	B	43	51	parallel
Strand 5	B	34	40	anti-parallel
Strand 6	B	77	83	anti-parallel
Strand 7	B	4	10	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	139	first strand
Strand 2	B	144	154	anti-parallel
Strand 3	B	92	101	anti-parallel
Strand 4	B	182	187	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	113	first strand
Strand 2	B	194	196	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	129	131	first strand
Strand 2	B	174	176	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	325	326	first strand
Strand 2	B	369	373	parallel
Strand 3	B	255	259	parallel
Strand 4	B	391	394	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	566	567	first strand
Strand 2	B	600	601	parallel
Strand 3	B	640	646	parallel
Strand 4	B	536	542	parallel
Strand 5	B	664	666	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	10	first strand
Strand 2	C	59	62	parallel
Strand 3	C	22	24	anti-parallel
Strand 4	C	43	51	parallel
Strand 5	C	34	40	anti-parallel
Strand 6	C	77	83	anti-parallel
Strand 7	C	4	10	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	140	first strand
Strand 2	C	143	154	anti-parallel
Strand 3	C	92	101	anti-parallel
Strand 4	C	182	187	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	113	first strand
Strand 2	C	194	196	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	129	131	first strand
Strand 2	C	174	176	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	283	284	first strand
Strand 2	C	324	326	parallel
Strand 3	C	368	373	parallel
Strand 4	C	256	259	parallel
Strand 5	C	391	394	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	457	459	first strand
Strand 2	C	463	465	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	597	603	first strand
Strand 2	C	639	645	parallel
Strand 3	C	536	542	parallel
Strand 4	C	663	666	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	324	327	first strand
Strand 2	D	368	373	parallel
Strand 3	D	256	259	parallel
Strand 4	D	391	394	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	566	568	first strand
Strand 2	D	600	603	parallel
Strand 3	D	642	646	parallel
Strand 4	D	538	542	parallel
Strand 5	D	664	666	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	370	373	first strand
Strand 2	E	256	259	parallel
Strand 3	E	391	394	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	323	324	first strand
Strand 2	E	367	368	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	564	568	first strand
Strand 2	E	598	602	parallel
Strand 3	E	642	645	parallel
Strand 4	E	538	542	parallel
Strand 5	E	664	666	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	280	286	first strand
Strand 2	F	323	328	parallel
Strand 3	F	367	373	parallel
Strand 4	F	256	259	parallel
Strand 5	F	391	394	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	564	567	first strand
Strand 2	F	597	602	parallel
Strand 3	F	639	645	parallel
Strand 4	F	536	542	parallel
Strand 5	F	663	666	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	670	672	first strand
Strand 2	F	702	705	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9OMQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
9OMQ