Analysis of interatomic Contacts of Structural Units in PDB entry:
9ONK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9ONK entry

There are 3 chains in PDB entry 9ONK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 34ILE 458
C
 SER 19GLU 452
B
 ALA 2GLN 436
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 9ONK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 47Right-handed alpha
Helix 2
AA2
A
60 65Right-handed alpha
Helix 3
AA3
A
78 82Right-handed 310
Helix 4
AA4
A
89 95Right-handed alpha
Helix 5
AA5
A
97 114Right-handed alpha
Helix 6
AA6
A
123 130Right-handed alpha
Helix 7
AA7
A
132 145Right-handed alpha
Helix 8
AA8
A
159 175Right-handed alpha
Helix 9
AA9
A
205 207Right-handed 310
Helix 10
AB1
A
208 220Right-handed alpha
Helix 11
AB2
A
235 240Right-handed 310
Helix 12
AB3
A
255 266Right-handed alpha
Helix 13
AB4
A
276 292Right-handed alpha
Helix 14
AB5
A
293 322Right-handed alpha
Helix 15
AB6
A
338 345Right-handed alpha
Helix 16
AB7
A
359 369Right-handed alpha
Helix 17
AB8
A
381 392Right-handed alpha
Helix 18
AB9
A
400 403Right-handed 310
Helix 19
AC1
A
404 409Right-handed alpha
Helix 20
AC2
A
427 444Right-handed alpha
Helix 21
AC3
A
445 452Right-handed alpha
Helix 22
AC4
C
20 28Right-handed alpha
Helix 23
AC5
C
141 157Right-handed alpha
Helix 24
AC6
C
181 195Right-handed alpha
Helix 25
AC7
C
227 233Right-handed alpha
Helix 26
AC8
C
247 259Right-handed alpha
Helix 27
AC9
C
269 285Right-handed alpha
Helix 28
AD1
C
290 306Right-handed alpha
Helix 29
AD2
C
307 312Right-handed alpha
Helix 30
AD3
C
321 336Right-handed alpha
Helix 31
AD4
C
363 375Right-handed alpha
Helix 32
AD5
C
383 386Right-handed 310
Helix 33
AD6
C
387 392Right-handed alpha
Helix 34
AD7
C
415 433Right-handed alpha
Helix 35
AD8
B
19 29Right-handed alpha
Helix 36
AD9
B
41 57Right-handed alpha
Helix 37
AE1
B
68 75Right-handed alpha
Helix 38
AE2
B
76 91Right-handed alpha
Helix 39
AE3
B
101 108Right-handed alpha
Helix 40
AE4
B
110 122Right-handed alpha
Helix 41
AE5
B
141 157Right-handed alpha
Helix 42
AE6
B
181 195Right-handed alpha
Helix 43
AE7
B
227 233Right-handed alpha
Helix 44
AE8
B
247 259Right-handed alpha
Helix 45
AE9
B
270 286Right-handed alpha
Helix 46
AF1
B
290 308Right-handed alpha
Helix 47
AF2
B
321 336Right-handed alpha
Helix 48
AF3
B
348 354Right-handed 310
Helix 49
AF4
B
363 374Right-handed alpha
Helix 50
AF5
B
382 384Right-handed 310
Helix 51
AF6
B
385 393Right-handed alpha
Helix 52
AF7
B
408 412Right-handed 310
Helix 53
AF8
B
415 434Right-handed alpha
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There are 11 sheets in PDB entry 9ONK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 85first strand
Strand 2
A
53 56parallel
Strand 3
A
118 121parallel
Strand 4
A
148 151parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 224first strand
Strand 2
A
196 201parallel
Strand 3
A
246 248parallel
Strand 4
A
269 271parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 350first strand
Strand 2
A
326 329parallel
Strand 3
A
397 399parallel
Strand 4
A
414 416parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 354first strand
Strand 2
A
375 376parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
168 172first strand
Strand 2
C
237 243parallel
Strand 3
C
175 176parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
168 172first strand
Strand 2
C
237 243parallel
Strand 3
C
262 265parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
341 343first strand
Strand 2
C
316 319parallel
Strand 3
C
378 381parallel
Strand 4
C
396 398parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 5first strand
Strand 2
B
359 361parallel
Strand 3
B
338 344parallel
Strand 4
B
315 319parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 39first strand
Strand 2
B
95 100parallel
Strand 3
B
130 132parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 202first strand
Strand 2
B
171 176parallel
Strand 3
B
240 243parallel
Strand 4
B
262 265parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
379 381first strand
Strand 2
B
396 398parallel
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